fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008844 not found in 258aa AT3G23250.1 1st_not 0.518779342 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06180.1     MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY
Os008844_Os02t0 MGRAPCCEKMGLKRGPWTAEEDRILVAHIERHGHSNWRALPRQAGLLRCGKSCRLRWINY
                *** *****:***:***:*******: :*. ***.******: *****************

AT1G06180.1     LRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLHHS-
Os008844_Os02t0 LRPDIKRGNFTREEEDAIIHLHDLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEPKP
                *********** .***:** **:***********:*********************. . 

AT1G06180.1     ---------QDQNNKEDFVSTTAAEMPT----SPQQQSSSSADISAIT-----TLGNNND
Os008844_Os02t0 SSGREAAAPKRKATKKAAAVAVAIDVPTTVPVSPEQSLSTTTTSAATTEEYSYSMASSAD
                         : : .*:  . :.* ::**    **:*. *:::  :* *     ::... *

AT1G06180.1     ISNSNKDSATSSEDVLAIIDESFWSEVVLMDCDI--SGNEKNEKKIENWEGS--LDRNDK
Os008844_Os02t0 --HNTTDSFTSEEEFQ--IDDSFWSETLAMTVDSTDSGMEMSGGDPLGAGGASPSSSNDD
                  :...** **.*:.   **:*****.: *  *   ** * .  .  .  *:   . **.

AT1G06180.1     GYNHDM-EFWFDHLTSSSCIIGEMSDISEF
Os008844_Os02t0 ----DMDDFWLKLFIQA----GGMQNLPQI
                    ** :**:. : .:    * *.::.::
BoxShade v3.31 C (beta, 970507) Output
AT1G06180.1     M G R R P C C E K I G L K K G P W S A E E D R I L I N Y I S L H G H P N W R A L P K L A G L L R C G K S C R L R W I N Y
Os008844_Os02t0    M G R A P C C E K M G L K R G P W T A E E D R I L V A H I E R H G H S N W R A L P R Q A G L L R C G K S C R L R W I N Y
 
AT1G06180.1     L R P D I K R G N F T P H E E D T I I S L H Q L L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L H H S -
Os008844_Os02t0    L R P D I K R G N F T R E E E D A I I H L H D L L G N R W S A I A A R L P G R T D N E I K N V W H T H L K K R L E P K P
 
AT1G06180.1     - - - - - - - - - Q D Q N N K E D F V S T T A A E M P T - - - - S P Q Q Q S S S S A D I S A I T - - - - - T L G N N N D
Os008844_Os02t0    S S G R E A A A P K R K A T K K A A A V A V A I D V P T T V P V S P E Q S L S T T T T S A A T T E E Y S Y S M A S S A D
 
AT1G06180.1     I S N S N K D S A T S S E D V L A I I D E S F W S E V V L M D C D I - - S G N E K N E K K I E N W E G S - - L D R N D K
Os008844_Os02t0    - - H N T T D S F T S E E E F Q - - I D D S F W S E T L A M T V D S T D S G M E M S G G D P L G A G G A S P S S S N D D
 
AT1G06180.1     G Y N H D M - E F W F D H L T S S S C I I G E M S D I S E F
Os008844_Os02t0    - - - - D M D D F W L K L F I Q A - - - - G G M Q N L P Q I
 
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