fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010751 not found in 258aa AT3G23250.1 1st_not 0.532863849 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06180.1     MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY
Sb010751_Sorbi1 MGRAPCCEKMGLKRGPWTPEEDRVLVAHIERHGHSNWRALPKQAGLLRCGKSCRLRWINY
                *** *****:***:***:.****:*: :*. ***.******* *****************

AT1G06180.1     LRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLHHS-
Sb010751_Sorbi1 LRPDIKRGNFTAEEEDAIIQLHQMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEPTT
                ***********..***:**.***:**********:*********************. : 

AT1G06180.1     -------------QDQNNKEDFVS-----TTAAEMPTSPQQQ-----SSSSADISAITTL
Sb010751_Sorbi1 KPASQAPKRKPKKQQQQPETTAVTALEGPTTGAVVPVSPEQSLSTSTTSTTTDYSAASSM
                             *:*: :   *:     **.* :*.**:*.     :*:::* ** :::

AT1G06180.1     GNNNDISNSNKDSATSSEDVLAIIDESFWSEVVLMDCDISGNEKNEKKIENWEGSLDRND
Sb010751_Sorbi1 ENNADSSTSEEEEEEDYQ-----IDDSFWSETLAMTVDSSDDSGMQAAFGGAPSSVTSTN
                 ** * *.*:::.  . :     **:*****.: *  * *.:.  :  : .  .*:  .:

AT1G06180.1     KGYNHDMEFWFDHLTSSSCIIGEMSDISEF
Sb010751_Sorbi1 ---DDDMDFWLKLFMQA----GDMQNLPQI
                   :.**:**:. : .:    *:*.::.::
BoxShade v3.31 C (beta, 970507) Output
AT1G06180.1     M G R R P C C E K I G L K K G P W S A E E D R I L I N Y I S L H G H P N W R A L P K L A G L L R C G K S C R L R W I N Y
Sb010751_Sorbi1    M G R A P C C E K M G L K R G P W T P E E D R V L V A H I E R H G H S N W R A L P K Q A G L L R C G K S C R L R W I N Y
 
AT1G06180.1     L R P D I K R G N F T P H E E D T I I S L H Q L L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L H H S -
Sb010751_Sorbi1    L R P D I K R G N F T A E E E D A I I Q L H Q M L G N R W S A I A A R L P G R T D N E I K N V W H T H L K K R L E P T T
 
AT1G06180.1     - - - - - - - - - - - - - Q D Q N N K E D F V S - - - - - T T A A E M P T S P Q Q Q - - - - - S S S S A D I S A I T T L
Sb010751_Sorbi1    K P A S Q A P K R K P K K Q Q Q Q P E T T A V T A L E G P T T G A V V P V S P E Q S L S T S T T S T T T D Y S A A S S M
 
AT1G06180.1     G N N N D I S N S N K D S A T S S E D V L A I I D E S F W S E V V L M D C D I S G N E K N E K K I E N W E G S L D R N D
Sb010751_Sorbi1    E N N A D S S T S E E E E E E D Y Q - - - - - I D D S F W S E T L A M T V D S S D D S G M Q A A F G G A P S S V T S T N
 
AT1G06180.1     K G Y N H D M E F W F D H L T S S S C I I G E M S D I S E F
Sb010751_Sorbi1    - - - D D D M D F W L K L F M Q A - - - - G D M Q N L P Q I
 
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