fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002620 not found in 264aa AT1G06180.1 1st_1st 0.544600938 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06180.1     MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY
gm002620_Glyma0 MVRAPCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY
                * * *****:*******:.***:**:.**. *** *************************

AT1G06180.1     LRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLHHSQ
gm002620_Glyma0 LRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLNSD
                **********:..**: **.:*:********************************* :*:

AT1G06180.1     DQN-------NKEDFVSTTAAEMPTSPQQQSSSSADISAITTLGNNNDISNSNKDSATSS
gm002620_Glyma0 IQKRVSKPRIKRSDSNSSTLTQLEPTSSACTTSLSDFSSFSE-------GTKNMDNMIKS
                 *:       ::.*  *:* ::: .:..  ::* :*:*:::        ...* *.  .*

AT1G06180.1     EDVLAI------IDESFWSEVVL------MDCDISGNEKNE--------KKIENW-EGSL
gm002620_Glyma0 EDIESVETIMPPIDESFWSEATVDYESSTMMTSNSWTISNELAPPQYQFNSVESFQQQSV
                **: ::      ********..:      *  . * . .**        :.:*.: : *:

AT1G06180.1     DRNDKGYNHD-MEFWFDHLTSSSCIIGEMSDISEF
gm002620_Glyma0 DYNGSNDDHDGMDFWYDIFIKS----GESIELPEF
                * *... :** *:**:* : .*    **  ::.**
BoxShade v3.31 C (beta, 970507) Output
AT1G06180.1     M G R R P C C E K I G L K K G P W S A E E D R I L I N Y I S L H G H P N W R A L P K L A G L L R C G K S C R L R W I N Y
gm002620_Glyma0    M V R A P C C E K M G L K K G P W T P E E D Q I L M S Y I Q K H G H G N W R A L P K L A G L L R C G K S C R L R W I N Y
 
AT1G06180.1     L R P D I K R G N F T P H E E D T I I S L H Q L L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L H H S Q
gm002620_Glyma0    L R P D I K R G N F S S E E E E I I I K M H E L L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L L N S D
 
AT1G06180.1     D Q N - - - - - - - N K E D F V S T T A A E M P T S P Q Q Q S S S S A D I S A I T T L G N N N D I S N S N K D S A T S S
gm002620_Glyma0    I Q K R V S K P R I K R S D S N S S T L T Q L E P T S S A C T T S L S D F S S F S E - - - - - - - G T K N M D N M I K S
 
AT1G06180.1     E D V L A I - - - - - - I D E S F W S E V V L - - - - - - M D C D I S G N E K N E - - - - - - - - K K I E N W - E G S L
gm002620_Glyma0    E D I E S V E T I M P P I D E S F W S E A T V D Y E S S T M M T S N S W T I S N E L A P P Q Y Q F N S V E S F Q Q Q S V
 
AT1G06180.1     D R N D K G Y N H D - M E F W F D H L T S S S C I I G E M S D I S E F
gm002620_Glyma0    D Y N G S N D D H D G M D F W Y D I F I K S - - - - G E S I E L P E F
 
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