Input
| Putative repression domain
|
|
AT1G06280.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm016489 |
not found in 92aa |
AT1G06280.1 |
not_1st |
0.419672131 |
II |
Pt015209 |
not found in 229aa |
AT1G06280.1 |
not_1st |
0.439344262 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G06280.1 MMQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF
pt015209_POPTR_ -MQRGRDS-------NNRVAMHQACASCKHQRKRCAEDCVLAPYFPAERMQEFQAVHKVF
gm016489_Glyma0 --------------------MHPACAACKHQRKKCSENCILGPYFPSNKNQEFHAVHKVF
* ***:******:* ::*:*.****:.: :**:******
AT1G06280.1 GVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQ
pt015209_POPTR_ GVSNVIKLVKDVDKERQKETADSLVWEASCRQDDPVLGCYGKFKKIQEELELYKM---QT
gm016489_Glyma0 GVSNITKLVKNAKTEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNE-----------
****: *:*: . * : : *** *** ** **: * **:: :: :*
AT1G06280.1 PLIGWDNNQRVFNNNS----NNKNGLAMTNSSGSGGFSVNNNGVGVNREIVNGGYASRNV
pt015209_POPTR_ PL----PNQNILRQRQGGAAYNKQPLLLAWNATHG---INNRGNG-----IGGGLANNNV
gm016489_Glyma0 --------------------YKK-------------------------------------
:*
AT1G06280.1 QGGWENLKHDQ-----------------RQQ-----------------------CYAVIN
pt015209_POPTR_ A----NYCHDNSSLMVDSVPHSYPWQFVRGQDKSNPERDATSLLLPIQPSPPPHPFSV--
gm016489_Glyma0 ------------------------------------------------------------
AT1G06280.1 NGFKQ--HYLPL------
pt015209_POPTR_ NGFNQQEYYHPVMRYACE
gm016489_Glyma0 ------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G06280.1 |
M |
M |
Q |
R |
N |
S |
N |
N |
T |
S |
I |
T |
S |
N |
I |
S |
N |
N |
S |
S |
S |
H |
Q |
A |
C |
A |
S |
C |
K |
H |
Q |
R |
K |
K |
C |
N |
N |
E |
C |
I |
L |
S |
P |
Y |
F |
P |
A |
R |
K |
T |
K |
E |
F |
Q |
A |
V |
H |
K |
V |
F |
pt015209_POPTR_ |
- |
M |
Q |
R |
G |
R |
D |
S |
- |
- |
- |
- |
- |
- |
- |
N |
N |
R |
V |
A |
M |
H |
Q |
A |
C |
A |
S |
C |
K |
H |
Q |
R |
K |
R |
C |
A |
E |
D |
C |
V |
L |
A |
P |
Y |
F |
P |
A |
E |
R |
M |
Q |
E |
F |
Q |
A |
V |
H |
K |
V |
F |
gm016489_Glyma0 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
H |
P |
A |
C |
A |
A |
C |
K |
H |
Q |
R |
K |
K |
C |
S |
E |
N |
C |
I |
L |
G |
P |
Y |
F |
P |
S |
N |
K |
N |
Q |
E |
F |
H |
A |
V |
H |
K |
V |
F |
|
AT1G06280.1 |
G |
V |
S |
N |
V |
Q |
K |
M |
V |
R |
T |
V |
R |
E |
E |
D |
R |
T |
K |
L |
S |
D |
S |
L |
T |
W |
E |
A |
L |
W |
R |
Q |
K |
D |
P |
V |
L |
G |
S |
Y |
G |
E |
Y |
R |
R |
I |
C |
E |
E |
L |
K |
L |
Y |
K |
S |
L |
V |
H |
N |
Q |
pt015209_POPTR_ |
G |
V |
S |
N |
V |
I |
K |
L |
V |
K |
D |
V |
D |
K |
E |
R |
Q |
K |
E |
T |
A |
D |
S |
L |
V |
W |
E |
A |
S |
C |
R |
Q |
D |
D |
P |
V |
L |
G |
C |
Y |
G |
K |
F |
K |
K |
I |
Q |
E |
E |
L |
E |
L |
Y |
K |
M |
- |
- |
- |
Q |
T |
gm016489_Glyma0 |
G |
V |
S |
N |
I |
T |
K |
L |
V |
K |
N |
A |
K |
T |
E |
D |
R |
R |
K |
V |
V |
D |
S |
L |
I |
W |
E |
A |
C |
C |
R |
Q |
R |
D |
P |
I |
Q |
G |
P |
Y |
G |
E |
Y |
T |
K |
V |
Y |
N |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT1G06280.1 |
P |
L |
I |
G |
W |
D |
N |
N |
Q |
R |
V |
F |
N |
N |
N |
S |
- |
- |
- |
- |
N |
N |
K |
N |
G |
L |
A |
M |
T |
N |
S |
S |
G |
S |
G |
G |
F |
S |
V |
N |
N |
N |
G |
V |
G |
V |
N |
R |
E |
I |
V |
N |
G |
G |
Y |
A |
S |
R |
N |
V |
pt015209_POPTR_ |
P |
L |
- |
- |
- |
- |
P |
N |
Q |
N |
I |
L |
R |
Q |
R |
Q |
G |
G |
A |
A |
Y |
N |
K |
Q |
P |
L |
L |
L |
A |
W |
N |
A |
T |
H |
G |
- |
- |
- |
I |
N |
N |
R |
G |
N |
G |
- |
- |
- |
- |
- |
I |
G |
G |
G |
L |
A |
N |
N |
N |
V |
gm016489_Glyma0 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Y |
K |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT1G06280.1 |
Q |
G |
G |
W |
E |
N |
L |
K |
H |
D |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
Q |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
Y |
A |
V |
I |
N |
pt015209_POPTR_ |
A |
- |
- |
- |
- |
N |
Y |
C |
H |
D |
N |
S |
S |
L |
M |
V |
D |
S |
V |
P |
H |
S |
Y |
P |
W |
Q |
F |
V |
R |
G |
Q |
D |
K |
S |
N |
P |
E |
R |
D |
A |
T |
S |
L |
L |
L |
P |
I |
Q |
P |
S |
P |
P |
P |
H |
P |
F |
S |
V |
- |
- |
gm016489_Glyma0 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT1G06280.1 |
N |
G |
F |
K |
Q |
- |
- |
H |
Y |
L |
P |
L |
- |
- |
- |
- |
- |
- |
pt015209_POPTR_ |
N |
G |
F |
N |
Q |
Q |
E |
Y |
Y |
H |
P |
V |
M |
R |
Y |
A |
C |
E |
gm016489_Glyma0 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
|