fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033488 not found in 131aa AT1G06280.1 1st_1st 0.426229508 Ia
Pt013193 not found in 245aa AT1G06280.1 1st_1st 0.455737704 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G06280.1     MMQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF
gm033488_Glyma1 --------------------MHPACAACKHQRKKCSENCILEPYFPSNRSREFYAVHKVF
pt013193_POPTR_ -MQRENN----SDNNNNRTLVHPACASCKHQRKRCTEDCALAPYFPAEKTQEFQAVHKVF
                                     * ***:******:*.::* * ****:.:::** ******

AT1G06280.1     GVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYK----SL
gm033488_Glyma1 GVSNITKLVKNAKEEDRRKVVDSLIWEACCRQRDPIQGPYGEYTK---------------
pt013193_POPTR_ GVSNVVKLVKDVSEERRKETADSLVWEALCRQNDPVSGCYGKFKRLKEELDLYKTQHPSL
                ****: *:*: . ** * :  *** ***  **.**: * **:: :               

AT1G06280.1     VHNQPLIGWDNNQR----VFNNNS-------NNKNGLAMTNSSGSGGFSVNNNGVGVNRE
gm033488_Glyma1 ------------------VYN---------------------------------------
pt013193_POPTR_ NQNQ------NGQQQGGVVYNKQSPVMVYGINNR-----ANGIGGGGLANNN--------
                                  *:*                                       

AT1G06280.1     IVNGGYASRNVQGG-------WENLK--------HDQRQQC-----------YAVINNGF
gm033488_Glyma1 ----------------------EYKKVLDEIKRFRSQNQLLQIPSL------------GF
pt013193_POPTR_ MVSYGHDNENLIADSIQHNFHWDYVQSLDKSKRERDASSLL-LPSPPPLPHHYSI--NGF
                                      :  :        :.  .                   **

AT1G06280.1     K--QHYLPL-----------------------
gm033488_Glyma1 KSVQDLIACNGTKGE---------HK------
pt013193_POPTR_ NQQQYYLPGNFPICKLDRPVSFILHRDRRQVS
                :  *  :.
BoxShade v3.31 C (beta, 970507) Output
AT1G06280.1     M M Q R N S N N T S I T S N I S N N S S S H Q A C A S C K H Q R K K C N N E C I L S P Y F P A R K T K E F Q A V H K V F
gm033488_Glyma1    - - - - - - - - - - - - - - - - - - - - M H P A C A A C K H Q R K K C S E N C I L E P Y F P S N R S R E F Y A V H K V F
pt013193_POPTR_    - M Q R E N N - - - - S D N N N N R T L V H P A C A S C K H Q R K R C T E D C A L A P Y F P A E K T Q E F Q A V H K V F
 
AT1G06280.1     G V S N V Q K M V R T V R E E D R T K L S D S L T W E A L W R Q K D P V L G S Y G E Y R R I C E E L K L Y K - - - - S L
gm033488_Glyma1    G V S N I T K L V K N A K E E D R R K V V D S L I W E A C C R Q R D P I Q G P Y G E Y T K - - - - - - - - - - - - - - -
pt013193_POPTR_    G V S N V V K L V K D V S E E R R K E T A D S L V W E A L C R Q N D P V S G C Y G K F K R L K E E L D L Y K T Q H P S L
 
AT1G06280.1     V H N Q P L I G W D N N Q R - - - - V F N N N S - - - - - - - N N K N G L A M T N S S G S G G F S V N N N G V G V N R E
gm033488_Glyma1    - - - - - - - - - - - - - - - - - - V Y N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt013193_POPTR_    N Q N Q - - - - - - N G Q Q Q G G V V Y N K Q S P V M V Y G I N N R - - - - - A N G I G G G G L A N N N - - - - - - - -
 
AT1G06280.1     I V N G G Y A S R N V Q G G - - - - - - - W E N L K - - - - - - - - H D Q R Q Q C - - - - - - - - - - - Y A V I N N G F
gm033488_Glyma1    - - - - - - - - - - - - - - - - - - - - - - E Y K K V L D E I K R F R S Q N Q L L Q I P S L - - - - - - - - - - - - G F
pt013193_POPTR_    M V S Y G H D N E N L I A D S I Q H N F H W D Y V Q S L D K S K R E R D A S S L L - L P S P P P L P H H Y S I - - N G F
 
AT1G06280.1     K - - Q H Y L P L - - - - - - - - - - - - - - - - - - - - - - -
gm033488_Glyma1    K S V Q D L I A C N G T K G E - - - - - - - - - H K - - - - - -
pt013193_POPTR_    N Q Q Q Y Y L P G N F P I C K L D R P V S F I L H R D R R Q V S
 
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