fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004347 not found in 208aa AT1G06280.1 1st_1st 0.291803278 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06280.1     MMQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF
Sb004347_Sorbi1 -----------------------ACAVCKHQRRKCEPNCELATYFPAHRMNDFRALHLVF
                                       *** *****:**: :* *:.****:: ::*:*:* **

AT1G06280.1     GVSNVQKMVR-TVREEDRTKLSDSLTWEALWRQKDPVLGSYGE---YRR-----ICEELK
Sb004347_Sorbi1 GVANLTKLIKANASDAARRRAAETLTWEARWRERDPSDGCYREVSCLRRDNAVLRAENAA
                **:*: *::: .. :  * : :::***** **::**  *.* *    **      .*:  

AT1G06280.1     LYKSLVHNQPLIGWDNNQRVFNNNSNNKNGLAMTNSSGSGG-------------------
Sb004347_Sorbi1 LRRQLAEQQQLL------LCWSNACSNTGGALLHSASANNGTPPCGGDGLLTAARPHHAP
                * :.*..:* *:        :.* ..*..*  : .:*...*                   

AT1G06280.1     -------FSVNNNGVGV-NREIVNGG-------YASRNVQGGWENLKHDQRQQCYAVINN
Sb004347_Sorbi1 AAPAAMHTTLAYRGMPVCTMTTANGGGRRPASDAAAIAIRGGGGQVDASRDNKSSAR---
                        ::  .*: * .   .***        *:  ::**  ::. .: ::. *    

AT1G06280.1     GFKQHYLPL
Sb004347_Sorbi1 ---------
BoxShade v3.31 C (beta, 970507) Output
AT1G06280.1     M M Q R N S N N T S I T S N I S N N S S S H Q A C A S C K H Q R K K C N N E C I L S P Y F P A R K T K E F Q A V H K V F
Sb004347_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - A C A V C K H Q R R K C E P N C E L A T Y F P A H R M N D F R A L H L V F
 
AT1G06280.1     G V S N V Q K M V R - T V R E E D R T K L S D S L T W E A L W R Q K D P V L G S Y G E - - - Y R R - - - - - I C E E L K
Sb004347_Sorbi1    G V A N L T K L I K A N A S D A A R R R A A E T L T W E A R W R E R D P S D G C Y R E V S C L R R D N A V L R A E N A A
 
AT1G06280.1     L Y K S L V H N Q P L I G W D N N Q R V F N N N S N N K N G L A M T N S S G S G G - - - - - - - - - - - - - - - - - - -
Sb004347_Sorbi1    L R R Q L A E Q Q Q L L - - - - - - L C W S N A C S N T G G A L L H S A S A N N G T P P C G G D G L L T A A R P H H A P
 
AT1G06280.1     - - - - - - - F S V N N N G V G V - N R E I V N G G - - - - - - - Y A S R N V Q G G W E N L K H D Q R Q Q C Y A V I N N
Sb004347_Sorbi1    A A P A A M H T T L A Y R G M P V C T M T T A N G G G R R P A S D A A A I A I R G G G G Q V D A S R D N K S S A R - - -
 
AT1G06280.1     G F K Q H Y L P L
Sb004347_Sorbi1    - - - - - - - - -
 
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