fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004347 not found in 208aa AT1G06280.1 1st_1st 0.291803278 Ib
Gm033488 not found in 131aa AT1G06280.1 1st_1st 0.426229508 Ia
Gm016489 not found in 92aa AT1G06280.1 not_1st 0.419672131 II
Pt013193 not found in 245aa AT1G06280.1 1st_1st 0.455737704 Ia
Pt015209 not found in 229aa AT1G06280.1 not_1st 0.439344262 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G06280.1     MMQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF
gm016489_Glyma0 --------------------MHPACAACKHQRKKCSENCILGPYFPSNKNQEFHAVHKVF
gm033488_Glyma1 --------------------MHPACAACKHQRKKCSENCILEPYFPSNRSREFYAVHKVF
Sb004347_Sorbi1 -----------------------ACAVCKHQRRKCEPNCELATYFPAHRMNDFRALHLVF
pt013193_POPTR_ -MQRENNSD----NNNNRTLVHPACASCKHQRKRCTEDCALAPYFPAEKTQEFQAVHKVF
pt015209_POPTR_ -MQRGRDS-------NNRVAMHQACASCKHQRKRCAEDCVLAPYFPAERMQEFQAVHKVF
                                       *** *****::*  :* * .***:.: .:* *:* **

AT1G06280.1     GVSNVQKMVR-TVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHN
gm016489_Glyma0 GVSNITKLVK-NAKTEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNE----------
gm033488_Glyma1 GVSNITKLVK-NAKEEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNE----------
Sb004347_Sorbi1 GVANLTKLIKANASDAARRRAAETLTWEARWRERDPSDGCYREVSCLRRDNAVLRA----
pt013193_POPTR_ GVSNVVKLVK-DVSEERRKETADSLVWEALCRQNDPVSGCYGKFKRLKEELDLYKT---Q
pt015209_POPTR_ GVSNVIKLVK-DVDKERQKETADSLVWEASCRQDDPVLGCYGKFKKIQEELELYKM---Q
                **:*: *:::  .    : .  ::* ***  *: **  * * :   : .:          

AT1G06280.1     QPLIGWDNNQRVFNNNSNNKNGLAMTNSS------GSGGFSVNNNGVGVNREIVNGGYAS
gm016489_Glyma0 -------------------------YKK--------------------------------
gm033488_Glyma1 -------------------------YKKV-------------------------------
Sb004347_Sorbi1 -------ENAALRRQLAEQQQLLLCWSNA------------CSNTGGAL----LHSASAN
pt013193_POPTR_ HPSL----NQ----NQNGQQQGGVVYNKQSPVMV-----YGINNRANGIG----GGGLAN
pt015209_POPTR_ TPLP----NQ----NILRQRQGGAAYNKQ-PLLLAWNATHGINNRGNGI-----GGGLAN
                                          ..                                

AT1G06280.1     RNVQGGWENLKHD--------------------------QRQQCYAV-IN----------
gm016489_Glyma0 ------------------------------------------------------------
gm033488_Glyma1 ---------------------------------LDEIKRFRSQNQLLQIP----------
Sb004347_Sorbi1 NGTP----PCGGD--GLLTAARPHH-----------------------APAAPAAMHTTL
pt013193_POPTR_ NNMV----SYGHDNENLIADSIQHNFHWDYVQSLDKSKRERDASSLL-LP-SPPPLPHHY
pt015209_POPTR_ NNVA----NYCHDNSSLMVDSVPHSYPWQFVRGQDKSNPERDATSLL-LPIQPSPPPHPF
                                                                            

AT1G06280.1     --NGFK--QHYLPL--------------------------------------------
gm016489_Glyma0 ----------------------------------------------------------
gm033488_Glyma1 SL-GFKSVQ-----DLIACNGT-------KGE-----------------HK-------
Sb004347_Sorbi1 AYRGMP-----------VCTMTTANGGGRRPASDAAAIAIRGGGGQVDASRDNKSSAR
pt013193_POPTR_ SINGFNQQQYYLPGNFPICKLD-------RPVS-------------FILHRDRRQVS-
pt015209_POPTR_ SVNGFNQQEYYHPVMRYACE--------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G06280.1     M M Q R N S N N T S I T S N I S N N S S S H Q A C A S C K H Q R K K C N N E C I L S P Y F P A R K T K E F Q A V H K V F
gm016489_Glyma0    - - - - - - - - - - - - - - - - - - - - M H P A C A A C K H Q R K K C S E N C I L G P Y F P S N K N Q E F H A V H K V F
gm033488_Glyma1    - - - - - - - - - - - - - - - - - - - - M H P A C A A C K H Q R K K C S E N C I L E P Y F P S N R S R E F Y A V H K V F
Sb004347_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - A C A V C K H Q R R K C E P N C E L A T Y F P A H R M N D F R A L H L V F
pt013193_POPTR_    - M Q R E N N S D - - - - N N N N R T L V H P A C A S C K H Q R K R C T E D C A L A P Y F P A E K T Q E F Q A V H K V F
pt015209_POPTR_    - M Q R G R D S - - - - - - - N N R V A M H Q A C A S C K H Q R K R C A E D C V L A P Y F P A E R M Q E F Q A V H K V F
 
AT1G06280.1     G V S N V Q K M V R - T V R E E D R T K L S D S L T W E A L W R Q K D P V L G S Y G E Y R R I C E E L K L Y K S L V H N
gm016489_Glyma0    G V S N I T K L V K - N A K T E D R R K V V D S L I W E A C C R Q R D P I Q G P Y G E Y T K V Y N E - - - - - - - - - -
gm033488_Glyma1    G V S N I T K L V K - N A K E E D R R K V V D S L I W E A C C R Q R D P I Q G P Y G E Y T K V Y N E - - - - - - - - - -
Sb004347_Sorbi1    G V A N L T K L I K A N A S D A A R R R A A E T L T W E A R W R E R D P S D G C Y R E V S C L R R D N A V L R A - - - -
pt013193_POPTR_    G V S N V V K L V K - D V S E E R R K E T A D S L V W E A L C R Q N D P V S G C Y G K F K R L K E E L D L Y K T - - - Q
pt015209_POPTR_    G V S N V I K L V K - D V D K E R Q K E T A D S L V W E A S C R Q D D P V L G C Y G K F K K I Q E E L E L Y K M - - - Q
 
AT1G06280.1     Q P L I G W D N N Q R V F N N N S N N K N G L A M T N S S - - - - - - G S G G F S V N N N G V G V N R E I V N G G Y A S
gm016489_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - Y K K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm033488_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - Y K K V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb004347_Sorbi1    - - - - - - - E N A A L R R Q L A E Q Q Q L L L C W S N A - - - - - - - - - - - - C S N T G G A L - - - - L H S A S A N
pt013193_POPTR_    H P S L - - - - N Q - - - - N Q N G Q Q Q G G V V Y N K Q S P V M V - - - - - Y G I N N R A N G I G - - - - G G G L A N
pt015209_POPTR_    T P L P - - - - N Q - - - - N I L R Q R Q G G A A Y N K Q - P L L L A W N A T H G I N N R G N G I - - - - - G G G L A N
 
AT1G06280.1     R N V Q G G W E N L K H D - - - - - - - - - - - - - - - - - - - - - - - - - - Q R Q Q C Y A V - I N - - - - - - - - - -
gm016489_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm033488_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L D E I K R F R S Q N Q L L Q I P - - - - - - - - - -
Sb004347_Sorbi1    N G T P - - - - P C G G D - - G L L T A A R P H H - - - - - - - - - - - - - - - - - - - - - - - A P A A P A A M H T T L
pt013193_POPTR_    N N M V - - - - S Y G H D N E N L I A D S I Q H N F H W D Y V Q S L D K S K R E R D A S S L L - L P - S P P P L P H H Y
pt015209_POPTR_    N N V A - - - - N Y C H D N S S L M V D S V P H S Y P W Q F V R G Q D K S N P E R D A T S L L - L P I Q P S P P P H P F
 
AT1G06280.1     - - N G F K - - Q H Y L P L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm016489_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm033488_Glyma1    S L - G F K S V Q - - - - - D L I A C N G T - - - - - - - K G E - - - - - - - - - - - - - - - - - H K - - - - - - -
Sb004347_Sorbi1    A Y R G M P - - - - - - - - - - - V C T M T T A N G G G R R P A S D A A A I A I R G G G G Q V D A S R D N K S S A R
pt013193_POPTR_    S I N G F N Q Q Q Y Y L P G N F P I C K L D - - - - - - - R P V S - - - - - - - - - - - - - F I L H R D R R Q V S -
pt015209_POPTR_    S V N G F N Q Q E Y Y H P V M R Y A C E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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