fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015209 not found in 229aa AT1G06280.1 not_1st 0.439344262 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06280.1     MMQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF
pt015209_POPTR_ -MQRGRDS-------NNRVAMHQACASCKHQRKRCAEDCVLAPYFPAERMQEFQAVHKVF
                 ***. :.       .*. : ************:* ::*:*:*****.: :*********

AT1G06280.1     GVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQ
pt015209_POPTR_ GVSNVIKLVKDVDKERQKETADSLVWEASCRQDDPVLGCYGKFKKIQEELELYKM---QT
                ***** *:*: * :* :.: :***.***  **.*****.**::::* ***:***    : 

AT1G06280.1     PLIGWDNNQRVFNNNSN----NKNGLAMTNSSGSGGFSVNNNGVGVNREIVNGGYASRNV
pt015209_POPTR_ PL----PNQNILRQRQGGAAYNKQPLLLAWNATHG---INNRGNG-----IGGGLANNNV
                **     **.::.:...    **: * :: .:  *   :**.* *     :.** *..**

AT1G06280.1     QGGWENLKHDQ-----------------RQQ-----------------------CYAVIN
pt015209_POPTR_ A----NYCHDNSSLMVDSVPHSYPWQFVRGQDKSNPERDATSLLLPIQPSPPPHPFSV--
                     *  **:                 * *                        ::*  

AT1G06280.1     NGFKQ--HYLPL------
pt015209_POPTR_ NGFNQQEYYHPVMRYACE
                ***:*  :* *:
BoxShade v3.31 C (beta, 970507) Output
AT1G06280.1     M M Q R N S N N T S I T S N I S N N S S S H Q A C A S C K H Q R K K C N N E C I L S P Y F P A R K T K E F Q A V H K V F
pt015209_POPTR_    - M Q R G R D S - - - - - - - N N R V A M H Q A C A S C K H Q R K R C A E D C V L A P Y F P A E R M Q E F Q A V H K V F
 
AT1G06280.1     G V S N V Q K M V R T V R E E D R T K L S D S L T W E A L W R Q K D P V L G S Y G E Y R R I C E E L K L Y K S L V H N Q
pt015209_POPTR_    G V S N V I K L V K D V D K E R Q K E T A D S L V W E A S C R Q D D P V L G C Y G K F K K I Q E E L E L Y K M - - - Q T
 
AT1G06280.1     P L I G W D N N Q R V F N N N S N - - - - N K N G L A M T N S S G S G G F S V N N N G V G V N R E I V N G G Y A S R N V
pt015209_POPTR_    P L - - - - P N Q N I L R Q R Q G G A A Y N K Q P L L L A W N A T H G - - - I N N R G N G - - - - - I G G G L A N N N V
 
AT1G06280.1     Q G G W E N L K H D Q - - - - - - - - - - - - - - - - - R Q Q - - - - - - - - - - - - - - - - - - - - - - - C Y A V I N
pt015209_POPTR_    A - - - - N Y C H D N S S L M V D S V P H S Y P W Q F V R G Q D K S N P E R D A T S L L L P I Q P S P P P H P F S V - -
 
AT1G06280.1     N G F K Q - - H Y L P L - - - - - -
pt015209_POPTR_    N G F N Q Q E Y Y H P V M R Y A C E
 
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