fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013193 not found in 245aa AT1G06280.1 1st_1st 0.455737704 Ia
Pt015209 not found in 229aa AT1G06280.1 not_1st 0.439344262 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G06280.1     MMQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF
pt015209_POPTR_ -MQRGRDS-------NNRVAMHQACASCKHQRKRCAEDCVLAPYFPAERMQEFQAVHKVF
pt013193_POPTR_ -MQRENNSD----NNNNRTLVHPACASCKHQRKRCTEDCALAPYFPAEKTQEFQAVHKVF
                 ***  :.       .*.   * **********:* ::* *:*****.: :*********

AT1G06280.1     GVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQ
pt015209_POPTR_ GVSNVIKLVKDVDKERQKETADSLVWEASCRQDDPVLGCYGKFKKIQEELELYKM---QT
pt013193_POPTR_ GVSNVVKLVKDVSEERRKETADSLVWEALCRQNDPVSGCYGKFKRLKEELDLYKT---QH
                ***** *:*: * :* :.: :***.***  **.*** *.**::::: ***.***    : 

AT1G06280.1     PLIGWDNNQRVFNNNSNNKNGLAMTNSS------GSGGFSVNNNGVGVNREIVNGGYASR
pt015209_POPTR_ PLP----NQ----NILRQRQGGAAYNKQ-PLLLAWNATHGINNRGNGI-----GGGLANN
pt013193_POPTR_ PSL----NQ----NQNGQQQGGVVYNKQSPVMV-----YGINNRANGIG----GGGLANN
                *      **    *   :::* .  *..          ..:**.. *:     .** *..

AT1G06280.1     NVQGGWENLKHD--------------------------QRQQCYAVIN------------
pt015209_POPTR_ NVA----NYCHDNSSLMVDSVPHSYPWQFVRGQDKSNPERDATSLLLPIQPSPPPHPFSV
pt013193_POPTR_ NMV----SYGHDNENLIADSIQHNFHWDYVQSLDKSKRERDASSLLLP-SPPPLPHHYSI
                *:     .  **                          :*:    ::             

AT1G06280.1     NGFKQ--HYLPL-----------------------
pt015209_POPTR_ NGFNQQEYYHPVMRYACE-----------------
pt013193_POPTR_ NGFNQQQYYLPGNFPICKLDRPVSFILHRDRRQVS
                ***:*  :* *
BoxShade v3.31 C (beta, 970507) Output
AT1G06280.1     M M Q R N S N N T S I T S N I S N N S S S H Q A C A S C K H Q R K K C N N E C I L S P Y F P A R K T K E F Q A V H K V F
pt015209_POPTR_    - M Q R G R D S - - - - - - - N N R V A M H Q A C A S C K H Q R K R C A E D C V L A P Y F P A E R M Q E F Q A V H K V F
pt013193_POPTR_    - M Q R E N N S D - - - - N N N N R T L V H P A C A S C K H Q R K R C T E D C A L A P Y F P A E K T Q E F Q A V H K V F
 
AT1G06280.1     G V S N V Q K M V R T V R E E D R T K L S D S L T W E A L W R Q K D P V L G S Y G E Y R R I C E E L K L Y K S L V H N Q
pt015209_POPTR_    G V S N V I K L V K D V D K E R Q K E T A D S L V W E A S C R Q D D P V L G C Y G K F K K I Q E E L E L Y K M - - - Q T
pt013193_POPTR_    G V S N V V K L V K D V S E E R R K E T A D S L V W E A L C R Q N D P V S G C Y G K F K R L K E E L D L Y K T - - - Q H
 
AT1G06280.1     P L I G W D N N Q R V F N N N S N N K N G L A M T N S S - - - - - - G S G G F S V N N N G V G V N R E I V N G G Y A S R
pt015209_POPTR_    P L P - - - - N Q - - - - N I L R Q R Q G G A A Y N K Q - P L L L A W N A T H G I N N R G N G I - - - - - G G G L A N N
pt013193_POPTR_    P S L - - - - N Q - - - - N Q N G Q Q Q G G V V Y N K Q S P V M V - - - - - Y G I N N R A N G I G - - - - G G G L A N N
 
AT1G06280.1     N V Q G G W E N L K H D - - - - - - - - - - - - - - - - - - - - - - - - - - Q R Q Q C Y A V I N - - - - - - - - - - - -
pt015209_POPTR_    N V A - - - - N Y C H D N S S L M V D S V P H S Y P W Q F V R G Q D K S N P E R D A T S L L L P I Q P S P P P H P F S V
pt013193_POPTR_    N M V - - - - S Y G H D N E N L I A D S I Q H N F H W D Y V Q S L D K S K R E R D A S S L L L P - S P P P L P H H Y S I
 
AT1G06280.1     N G F K Q - - H Y L P L - - - - - - - - - - - - - - - - - - - - - - -
pt015209_POPTR_    N G F N Q Q E Y Y H P V M R Y A C E - - - - - - - - - - - - - - - - -
pt013193_POPTR_    N G F N Q Q Q Y Y L P G N F P I C K L D R P V S F I L H R D R R Q V S
 
0