fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016489 not found in 92aa AT1G06280.1 not_1st 0.419672131 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06280.1     MMQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF
gm016489_Glyma0 --------------------MHPACAACKHQRKKCSENCILGPYFPSNKNQEFHAVHKVF
                                     * ***:********.::***.****:.*.:**:******

AT1G06280.1     GVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQ
gm016489_Glyma0 GVSNITKLVKNAKTEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNE---YKK-----
                ****: *:*:..: *** *: *** ***  **:**: *.**** :: :*   **.     

AT1G06280.1     PLIGWDNNQRVFNNNSNNKNGLAMTNSSGSGGFSVNNNGVGVNREIVNGGYASRNVQGGW
gm016489_Glyma0 ------------------------------------------------------------
                                                                            

AT1G06280.1     ENLKHDQRQQCYAVINNGFKQHYLPL
gm016489_Glyma0 --------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G06280.1     M M Q R N S N N T S I T S N I S N N S S S H Q A C A S C K H Q R K K C N N E C I L S P Y F P A R K T K E F Q A V H K V F
gm016489_Glyma0    - - - - - - - - - - - - - - - - - - - - M H P A C A A C K H Q R K K C S E N C I L G P Y F P S N K N Q E F H A V H K V F
 
AT1G06280.1     G V S N V Q K M V R T V R E E D R T K L S D S L T W E A L W R Q K D P V L G S Y G E Y R R I C E E L K L Y K S L V H N Q
gm016489_Glyma0    G V S N I T K L V K N A K T E D R R K V V D S L I W E A C C R Q R D P I Q G P Y G E Y T K V Y N E - - - Y K K - - - - -
 
AT1G06280.1     P L I G W D N N Q R V F N N N S N N K N G L A M T N S S G S G G F S V N N N G V G V N R E I V N G G Y A S R N V Q G G W
gm016489_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G06280.1     E N L K H D Q R Q Q C Y A V I N N G F K Q H Y L P L
gm016489_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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