fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06850.1 ANENTELKLRLQAMEQ at 209/337 in AT1G06850.1
ANENTELKLRLQAMEQ at 209/250 in AT1G06850.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014180 STENTELKLRLQAMEQ in 241/379 AT2G40620.1 not_not 0.533333333 III
Pt014165 TTENSELKLRLQAMEQ in 179/318 AT2G40620.1 not_not 0.470967741 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G06850.1     MEKSDP---PPV----PKPGATIIPSSDPIPNADPIPSSS---------------FHRRS
pt014165_POPTR_ MH------------------------DSSNSDASAFPFRSS--------------CHRRA
pt014180_POPTR_ METRDPLSKPPQNSDPPKP-------NNPNPNPTVSPSSSSSSSSSMFNNIRGGAHHRRA
                *.                        ... .:.   *  *                ***:

AT1G06850.1     RS-------DDMSMFMF-MDPLSSAAPPSSDDLPSDDDLFSSFIDVDSLT----SNPNPF
pt014165_POPTR_ HSDVPFRVTDDLD-----LVP---------DELVSEEDLFCSYMNMEKLGSRPEEGPSGL
pt014180_POPTR_ HSEMSFRLPEDMTMMMMDLHPSDQINGGSLEEIGSEDDLFSTYIDVDKLTGGNNGNGTGV
                :*       :*:      : *         ::: *::***.::::::.*      . . .

AT1G06850.1     QNPSLSSNSVSG-----AANPPPPPSSRPRHRHSNSVDAGCAMYAGDIMDAKKAMPPEKL
pt014165_POPTR_ KQDNAEQEKAYV---------------RPRHKHSNSVD-GSSLM--ESIDSKKAMAPEKL
pt014180_POPTR_ GNQNDNDNTINGEKGGVSDSGPGSGTSRPKHRHSYSVD-GSVFGGGEVMEAKKAMPPNKL
                 : . ..:.                  **:*:** *** *. :   : :::****.*:**

AT1G06850.1     SELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQSLQTEATTLSAQLTLYQRDT
pt014165_POPTR_ AELWALDPKRAKRIMANRQSAARSKERKARYVSELERKVHTLQTEATTLSAQLTLFQRDT
pt014180_POPTR_ AELWSIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLFQRDT
                :*** :********:****************: ******::************:*:****

AT1G06850.1     NGLANENTELKLRLQAMEQQAQLRNALNEALRKEVERMKMETGEISGNSDSFDMGMQQIQ
pt014165_POPTR_ SSLTTENSELKLRLQAMEQQAQLRDALNEALKKEVERLKFATGEIMTPTDSYNLGIQHIP
pt014180_POPTR_ TGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVGRLKIATGEMLSPSDSYNLGMHQMP
                ..*:.**:****************:******:*** *:*: ***:   :**:::*:::: 

AT1G06850.1     YSSSTFMAIPPYHGSMNLHDMQMHS-SFNPMEMS---------NSQSVSDFLQN---GRM
pt014165_POPTR_ YNHSPLVSPRPRPGSVDALNIQIPQFHPLQSNLSPRQPGIAASHSHALSEMLPQDPLRWL
pt014180_POPTR_ FTPSNFFPLPSQPGPAGHPNMQLPSFTHSPSSMSTRH--IHQVDSQSLSDYMQNDPIGRL
                :. * :..  .  *. .  ::*: .      .:*         .*:::*: : :     :

AT1G06850.1     QGLEISSNSSSLVKSEGPSLSASESSSAY
pt014165_POPTR_ QGFDISSRSSVLVRSECPSISASEDSSL-
pt014180_POPTR_ QGLDISNKGSHIVKSEGPSLSASESSTTF
                **::**...* :*:** **:****.*:
BoxShade v3.31 C (beta, 970507) Output
AT1G06850.1     M E K S D P - - - P P V - - - - P K P G A T I I P S S D P I P N A D P I P S S S - - - - - - - - - - - - - - - F H R R S
pt014165_POPTR_    M H - - - - - - - - - - - - - - - - - - - - - - - - D S S N S D A S A F P F R S S - - - - - - - - - - - - - - C H R R A
pt014180_POPTR_    M E T R D P L S K P P Q N S D P P K P - - - - - - - N N P N P N P T V S P S S S S S S S S S M F N N I R G G A H H R R A
 
AT1G06850.1     R S - - - - - - - D D M S M F M F - M D P L S S A A P P S S D D L P S D D D L F S S F I D V D S L T - - - - S N P N P F
pt014165_POPTR_    H S D V P F R V T D D L D - - - - - L V P - - - - - - - - - D E L V S E E D L F C S Y M N M E K L G S R P E E G P S G L
pt014180_POPTR_    H S E M S F R L P E D M T M M M M D L H P S D Q I N G G S L E E I G S E D D L F S T Y I D V D K L T G G N N G N G T G V
 
AT1G06850.1     Q N P S L S S N S V S G - - - - - A A N P P P P P S S R P R H R H S N S V D A G C A M Y A G D I M D A K K A M P P E K L
pt014165_POPTR_    K Q D N A E Q E K A Y V - - - - - - - - - - - - - - - R P R H K H S N S V D - G S S L M - - E S I D S K K A M A P E K L
pt014180_POPTR_    G N Q N D N D N T I N G E K G G V S D S G P G S G T S R P K H R H S Y S V D - G S V F G G G E V M E A K K A M P P N K L
 
AT1G06850.1     S E L W N I D P K R A K R I L A N R Q S A A R S K E R K A R Y I Q E L E R K V Q S L Q T E A T T L S A Q L T L Y Q R D T
pt014165_POPTR_    A E L W A L D P K R A K R I M A N R Q S A A R S K E R K A R Y V S E L E R K V H T L Q T E A T T L S A Q L T L F Q R D T
pt014180_POPTR_    A E L W S I D P K R A K R I L A N R Q S A A R S K E R K A R Y I L E L E R K V Q T L Q T E A T T L S A Q L S L F Q R D T
 
AT1G06850.1     N G L A N E N T E L K L R L Q A M E Q Q A Q L R N A L N E A L R K E V E R M K M E T G E I S G N S D S F D M G M Q Q I Q
pt014165_POPTR_    S S L T T E N S E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V E R L K F A T G E I M T P T D S Y N L G I Q H I P
pt014180_POPTR_    T G L S T E N T E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E V G R L K I A T G E M L S P S D S Y N L G M H Q M P
 
AT1G06850.1     Y S S S T F M A I P P Y H G S M N L H D M Q M H S - S F N P M E M S - - - - - - - - - N S Q S V S D F L Q N - - - G R M
pt014165_POPTR_    Y N H S P L V S P R P R P G S V D A L N I Q I P Q F H P L Q S N L S P R Q P G I A A S H S H A L S E M L P Q D P L R W L
pt014180_POPTR_    F T P S N F F P L P S Q P G P A G H P N M Q L P S F T H S P S S M S T R H - - I H Q V D S Q S L S D Y M Q N D P I G R L
 
AT1G06850.1     Q G L E I S S N S S S L V K S E G P S L S A S E S S S A Y
pt014165_POPTR_    Q G F D I S S R S S V L V R S E C P S I S A S E D S S L -
pt014180_POPTR_    Q G L D I S N K G S H I V K S E G P S L S A S E S S T T F
 
0