fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06850.1 ANENTELKLRLQAMEQ at 209/337 in AT1G06850.1
ANENTELKLRLQAMEQ at 209/250 in AT1G06850.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004901 STENTELKLRLQAMEQ in 226/364 AT1G06850.1 not_1st 0.554838709 II
Gm040434 STENTELKLRLQAMEQ in 224/362 AT1G06850.1 not_1st 0.552688172 II
Gm048734 SSENTELKLRLQAMEQ in 225/363 AT1G06850.1 not_1st 0.449462365 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G06850.1     -MEKSDPP---PVPKPGATIIPSSDPIP------NADPIPSSS---------FHRRSRS-
gm040434_Glyma1 MQDPSSNPNSNPNPNPHNANAASQLPRPPPAT--TAGAGASSSSLFARSGGPHHRRAHSE
gm048734_Glyma1 ---MSATPSSSFFIRAAGGNGPSAAP--------VAGSGESHS---------HHRRAHSE
gm004901_Glyma0 MQDPSSNPNSNPNPNPHNANAASQLPRPPQATASTAVAGAFSSSLFARSGGPHHRRAHSE
                    *  *      ..     .*  *         * .    *         .***::* 

AT1G06850.1     ------DDMSMFMFMDPLSSAAPPSS-DDLPSDDDLFSSFIDVDSLTSNPNPFQNPSLSS
gm040434_Glyma1 VSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGG--------ANGS
gm048734_Glyma1 VSFRLPDDMIDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKL------------GA
gm004901_Glyma0 MSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLSG--------ANGS
                      ***  :   **: ..:..:* ::: *:*****::***:.*            .:

AT1G06850.1     NSVSGAANPP-----PP----------PSSRPRHRHS--------------NSVDAGCAM
gm040434_Glyma1 GASGNGADPTGETEKSPAR------------PRHRHS--------------SSVD-----
gm048734_Glyma1 GRGGNGSDQS--VRAPPLRGRDTGTVAPSTVPRRRACSERSWMRRKPCLLISSQS-----
gm004901_Glyma0 GGAGNGADPTGEREKSPAR------------PRHRQS--------------SSVD-----
                .  ...:: .     .*              **:* .              .* .     

AT1G06850.1     YAGDIM---------DAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKERKARYIQE
gm040434_Glyma1 -FGEIM---------DAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQE
gm048734_Glyma1 -FGTLIQSVPKESECDGLKLMSRKFLSTV----------ILANRQSAARSKERKARYIQE
gm004901_Glyma0 -FGEIM---------DAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQE
                  * ::         *. * *. . *: :          *********************

AT1G06850.1     LERKVQSLQTEATTLSAQLTLYQRDTNGLANENTELKLRLQAMEQQAQLRNALNEALRKE
gm040434_Glyma1 LERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKE
gm048734_Glyma1 LERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDVLNDALMKE
gm004901_Glyma0 LERKVQTLQTEATTLSAQLTLYQRDTSGLSTENTELKLRLQAMEQQAQLRDALNEALKKE
                ******:*******************.**:.*******************:.**:** **

AT1G06850.1     VERMKMETGEISGNSDSFDMGMQQIQYSSSTFMAIPPYHGSMNLHDMQM------HSSF-
gm040434_Glyma1 VERLKVATGEMMSHTDSFNLGMHLMPFSGSNFVPIPPQSGPSGHQNMQMPPFGLTPSTMP
gm048734_Glyma1 VERLKIATGEALNQSESFNLGMHQMPYAGSNFFSIPPHSGPSGHQNMQLPPFGHSHSTVP
gm004901_Glyma0 VERLKVATGEGMSHTESFNLGMHQMPFSGSNFIPIPPQSGPSGHQNMQMPPFGHSPSTMP
                ***:*: ***  .:::**::**: : ::.*.*..***  *. . ::**:       *:. 

AT1G06850.1     -NPMEMSNSQSVSDFLQN---GRMQGLEISSNSSSLVKSEGPSLSASESSSAY
gm040434_Glyma1 SHLLHQTSSHPYSEILQNDQLGRFQGLDISSKGSTLVKSEGPSLSASESSTTF
gm048734_Glyma1 THQLQQTNSHQMSDILQNDQLGRLQGLDISSKGTPVVKSEGPSISANESSTTF
gm004901_Glyma0 THQLHQTSSHPYSEILQNEQLGRFQGLDISSKGSTLVKSEGPSLSASESSSTF
                 : :. :.*:  *::***   **:***:***:.:.:*******:**.***:::
BoxShade v3.31 C (beta, 970507) Output
AT1G06850.1     - M E K S D P P - - - P V P K P G A T I I P S S D P I P - - - - - - N A D P I P S S S - - - - - - - - - F H R R S R S -
gm040434_Glyma1    M Q D P S S N P N S N P N P N P H N A N A A S Q L P R P P P A T - - T A G A G A S S S S L F A R S G G P H H R R A H S E
gm048734_Glyma1    - - - M S A T P S S S F F I R A A G G N G P S A A P - - - - - - - - V A G S G E S H S - - - - - - - - - H H R R A H S E
gm004901_Glyma0    M Q D P S S N P N S N P N P N P H N A N A A S Q L P R P P Q A T A S T A V A G A F S S S L F A R S G G P H H R R A H S E
 
AT1G06850.1     - - - - - - D D M S M F M F M D P L S S A A P P S S - D D L P S D D D L F S S F I D V D S L T S N P N P F Q N P S L S S
gm040434_Glyma1    V S F R L P D D M M D L S P S D P F A G G S S T A S M E E I G S E D D L F S T Y I D V D K L G G - - - - - - - - A N G S
gm048734_Glyma1    V S F R L P D D M I D L S P S D P F N G G S S T A S F E E I G S E D D L F S T Y I D V E K L - - - - - - - - - - - - G A
gm004901_Glyma0    M S F R L P D D M M D L S P S D P F A G G S S T A S M E E I G S E D D L F S T Y I D V D K L S G - - - - - - - - A N G S
 
AT1G06850.1     N S V S G A A N P P - - - - - P P - - - - - - - - - - P S S R P R H R H S - - - - - - - - - - - - - - N S V D A G C A M
gm040434_Glyma1    G A S G N G A D P T G E T E K S P A R - - - - - - - - - - - - P R H R H S - - - - - - - - - - - - - - S S V D - - - - -
gm048734_Glyma1    G R G G N G S D Q S - - V R A P P L R G R D T G T V A P S T V P R R R A C S E R S W M R R K P C L L I S S Q S - - - - -
gm004901_Glyma0    G G A G N G A D P T G E R E K S P A R - - - - - - - - - - - - P R H R Q S - - - - - - - - - - - - - - S S V D - - - - -
 
AT1G06850.1     Y A G D I M - - - - - - - - - D A K K A M P P E K L S E L W N I D P K R A K R I L A N R Q S A A R S K E R K A R Y I Q E
gm040434_Glyma1    - F G E I M - - - - - - - - - D A K K A M P P D K L A E L W T I D P K R A K R I L A N R Q S A A R S K E R K A R Y I Q E
gm048734_Glyma1    - F G T L I Q S V P K E S E C D G L K L M S R K F L S T V - - - - - - - - - - I L A N R Q S A A R S K E R K A R Y I Q E
gm004901_Glyma0    - F G E I M - - - - - - - - - D A K K A M P P D K L A E L W T I D P K R A K R I L A N R Q S A A R S K E R K A R Y I Q E
 
AT1G06850.1     L E R K V Q S L Q T E A T T L S A Q L T L Y Q R D T N G L A N E N T E L K L R L Q A M E Q Q A Q L R N A L N E A L R K E
gm040434_Glyma1    L E R K V Q T L Q T E A T T L S A Q L T L Y Q R D T T G L S T E N T E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E
gm048734_Glyma1    L E R K V Q T L Q T E A T T L S A Q L T L Y Q R D T T G L S S E N T E L K L R L Q A M E Q Q A Q L R D V L N D A L M K E
gm004901_Glyma0    L E R K V Q T L Q T E A T T L S A Q L T L Y Q R D T S G L S T E N T E L K L R L Q A M E Q Q A Q L R D A L N E A L K K E
 
AT1G06850.1     V E R M K M E T G E I S G N S D S F D M G M Q Q I Q Y S S S T F M A I P P Y H G S M N L H D M Q M - - - - - - H S S F -
gm040434_Glyma1    V E R L K V A T G E M M S H T D S F N L G M H L M P F S G S N F V P I P P Q S G P S G H Q N M Q M P P F G L T P S T M P
gm048734_Glyma1    V E R L K I A T G E A L N Q S E S F N L G M H Q M P Y A G S N F F S I P P H S G P S G H Q N M Q L P P F G H S H S T V P
gm004901_Glyma0    V E R L K V A T G E G M S H T E S F N L G M H Q M P F S G S N F I P I P P Q S G P S G H Q N M Q M P P F G H S P S T M P
 
AT1G06850.1     - N P M E M S N S Q S V S D F L Q N - - - G R M Q G L E I S S N S S S L V K S E G P S L S A S E S S S A Y
gm040434_Glyma1    S H L L H Q T S S H P Y S E I L Q N D Q L G R F Q G L D I S S K G S T L V K S E G P S L S A S E S S T T F
gm048734_Glyma1    T H Q L Q Q T N S H Q M S D I L Q N D Q L G R L Q G L D I S S K G T P V V K S E G P S I S A N E S S T T F
gm004901_Glyma0    T H Q L H Q T S S H P Y S E I L Q N E Q L G R F Q G L D I S S K G S T L V K S E G P S L S A S E S S S T F
 
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