fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G07980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021099 not found in 212aa AT1G07980.1 1st_1st 0.346278317 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G07980.1     --MVSSKKPKEKKARS---DVVVNKASGRSKRSSGSRTKKTSNKVNIVKKKPEIYEISES
pt021099_POPTR_ MERVAKSKREMKKKRSSSKEVVVVTKSKQEKKKSKSKTGNSS------PREPVVLLLSSS
                   *:..* : ** **   :*** . * :.*:.* *:* ::*       ::* :  :*.*

AT1G07980.1     SSSDSVEE---AIRGDEAKKSNGVVS---KRGNGKSVGIPTKTSKNREEDDGGAEDAK-I
pt021099_POPTR_ SSSSSDSQELIEIEGEDDETNSGIKNRSMKSSKIKSANNAKRKGKDDDLDGEGEEDGTAC
                ***.* .:    *.*:: :...*: .   * .: **.. ..:..*: : *. * **..  

AT1G07980.1     KFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHYKHL
pt021099_POPTR_ RFPMARIKRIIKSEDSESLLSQDVVFLVNKATEKFLEQFSDEAYDYSVQDRKKSLAYKHL
                :*** **:**::*::* . : **.********* *:*:**:**** **:*:** : ****

AT1G07980.1     SSVVSNDQRYEFLADSVPEKLKAEAALEEWERGMTDAG
pt021099_POPTR_ STVVSKRRRFDFLSDFVPEKLNAKDALADRTLAMTGQG
                *:***: :*::**:* *****:*: ** :   .**. *
BoxShade v3.31 C (beta, 970507) Output
AT1G07980.1     - - M V S S K K P K E K K A R S - - - D V V V N K A S G R S K R S S G S R T K K T S N K V N I V K K K P E I Y E I S E S
pt021099_POPTR_    M E R V A K S K R E M K K K R S S S K E V V V V T K S K Q E K K K S K S K T G N S S - - - - - - P R E P V V L L L S S S
 
AT1G07980.1     S S S D S V E E - - - A I R G D E A K K S N G V V S - - - K R G N G K S V G I P T K T S K N R E E D D G G A E D A K - I
pt021099_POPTR_    S S S S S D S Q E L I E I E G E D D E T N S G I K N R S M K S S K I K S A N N A K R K G K D D D L D G E G E E D G T A C
 
AT1G07980.1     K F P M N R I R R I M R S D N S A P Q I M Q D A V F L V N K A T E M F I E R F S E E A Y D S S V K D K K K F I H Y K H L
pt021099_POPTR_    R F P M A R I K R I I K S E D S E S L L S Q D V V F L V N K A T E K F L E Q F S D E A Y D Y S V Q D R K K S L A Y K H L
 
AT1G07980.1     S S V V S N D Q R Y E F L A D S V P E K L K A E A A L E E W E R G M T D A G
pt021099_POPTR_    S T V V S K R R R F D F L S D F V P E K L N A K D A L A D R T L A M T G Q G
 
0