fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G07980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033001 not found in 186aa AT1G07980.1 1st_1st 0.294498381 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G07980.1     MVSSKKPKEKKARSDVVVNKASGRSKRSSGSRTKKTSN----KVNIVKKKPEIYEISESS
gm033001_Glyma1 MASSNTPKPE--------NKKSTKKSEISKAEKKKTKNAEIPKTDGKTKKNK--EISQEE
                *.**:.** :        ** * :... * :..***.*    *.:  .** :  ***:..

AT1G07980.1     SSDSVEEAIRGDEAKKSNGVVSKRGNGKSVGIPTKTSKNREEDDGGAEDAKIK-FPMNRI
gm033001_Glyma1 NKKKIK------KAKLSNGTSKQRDEGSKKGVAA---------EGNGEEAKMNVFPMNRI
                ....::      :** ***. .:*.:*.. *:.:         :*..*:**:: ******

AT1G07980.1     RRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHYKHLSSVVSND
gm033001_Glyma1 RTMIKGEDPEMRVSQEALFAINNTVEKFLEQFTQDAYAFCAQDRKKCLSYDHLAHVVSKQ
                * :::.::.  :: *:*:* :*::.* *:*:*:::**  ..:*:** : *.**: ***::

AT1G07980.1     QRYEFLADSVPEKLKAEAALEEWERGMTDAG--
gm033001_Glyma1 RRYDFLSDFVPERVKAEDALR--ERSAAGKGGS
                :**:**:* ***::*** **.  **. :. *
BoxShade v3.31 C (beta, 970507) Output
AT1G07980.1     M V S S K K P K E K K A R S D V V V N K A S G R S K R S S G S R T K K T S N - - - - K V N I V K K K P E I Y E I S E S S
gm033001_Glyma1    M A S S N T P K P E - - - - - - - - N K K S T K K S E I S K A E K K K T K N A E I P K T D G K T K K N K - - E I S Q E E
 
AT1G07980.1     S S D S V E E A I R G D E A K K S N G V V S K R G N G K S V G I P T K T S K N R E E D D G G A E D A K I K - F P M N R I
gm033001_Glyma1    N K K K I K - - - - - - K A K L S N G T S K Q R D E G S K K G V A A - - - - - - - - - E G N G E E A K M N V F P M N R I
 
AT1G07980.1     R R I M R S D N S A P Q I M Q D A V F L V N K A T E M F I E R F S E E A Y D S S V K D K K K F I H Y K H L S S V V S N D
gm033001_Glyma1    R T M I K G E D P E M R V S Q E A L F A I N N T V E K F L E Q F T Q D A Y A F C A Q D R K K C L S Y D H L A H V V S K Q
 
AT1G07980.1     Q R Y E F L A D S V P E K L K A E A A L E E W E R G M T D A G - -
gm033001_Glyma1    R R Y D F L S D F V P E R V K A E D A L R - - E R S A A G K G G S
 
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