fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033191 not found in 323aa AT1G08290.1 1st_1st 0.535353535 Ia
Pt021080 not found in 335aa AT1G08290.1 1st_1st 0.551226551 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08290.1     -----MNSYETKGLSFESPSFIEWLKPQSSTTSSKSVLYRGKTRDAISRSNHH-QSQMNM
gm033191_Glyma1 MGLMECNVEDNKNLYLHAPTFIEWLKPCS---SPNSYLNNSNTISYSSS-----SSPSS-
pt021080_POPTR_ MGLRNYHVEDN-NLCFQAPNFIEWLKPSSTSPSPSSSSSSSSSLSSVSTQQVQLTNPMSI
                      :  :. .* :.:*.******* *   *..*    ..: .  *       .  . 

AT1G08290.1     LER-SLFLYQPQEPLNTSIQCLPLLNKLMENNSQASD-----------IKEENKDDV-VT
gm033191_Glyma1 ----SSFSLTQNEFVQETIQFLPI---LSEKASKDEDQSFE-------VKEEKVEQVTVA
pt021080_POPTR_ LKLASFFPPQQQESTKETIQCLPLLNRLTEKKTLKEEEDMEMQESTVGVKEEKIEKVTVA
                    * *    :*  : :** **:   * *: :  .:           :***: :.* *:

AT1G08290.1     LQIGFPKYHRGSSEDGSDITFDHQKKPIKREIIEDGVVMMKKRRKMKFDE-EIIDSDVEV
gm033191_Glyma1 LHIGLPDSNKGHADEVDEKMIFHVK--------EEEESSKRSFHGCSFNNQE--------
pt021080_POPTR_ LHIGLPNS----GDSGVETGVFDIK---------EEISMKKNFQGYSFNS-E--------
                *:**:*.     .:.  :  . . *         :     :. :  .*:. *        

AT1G08290.1     CGKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPA
gm033191_Glyma1 --RRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGT-QPA
pt021080_POPTR_ --SRFWIPTPAQILVGPMQFSCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGT-QPA
                   *****:**** ******:****************************.****** ***

AT1G08290.1     AILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDW
gm033191_Glyma1 AMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDW
pt021080_POPTR_ AMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKAFAVKGDW
                *:*********:**********:******************:*** * **.*::******

AT1G08290.1     RTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTECVTTE---
gm033191_Glyma1 RTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHNPHPP--FEAFEDEKECITGSDED
pt021080_POPTR_ RTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPS--LEGFEDEKECITGS-ED
                *********************************.**.***.  ::.**::.**:* .   

AT1G08290.1     -------
gm033191_Glyma1 EVNAHHT
pt021080_POPTR_ EF-AH--
BoxShade v3.31 C (beta, 970507) Output
AT1G08290.1     - - - - - M N S Y E T K G L S F E S P S F I E W L K P Q S S T T S S K S V L Y R G K T R D A I S R S N H H - Q S Q M N M
gm033191_Glyma1    M G L M E C N V E D N K N L Y L H A P T F I E W L K P C S - - - S P N S Y L N N S N T I S Y S S S - - - - - S S P S S -
pt021080_POPTR_    M G L R N Y H V E D N - N L C F Q A P N F I E W L K P S S T S P S P S S S S S S S S S L S S V S T Q Q V Q L T N P M S I
 
AT1G08290.1     L E R - S L F L Y Q P Q E P L N T S I Q C L P L L N K L M E N N S Q A S D - - - - - - - - - - - I K E E N K D D V - V T
gm033191_Glyma1    - - - - S S F S L T Q N E F V Q E T I Q F L P I - - - L S E K A S K D E D Q S F E - - - - - - - V K E E K V E Q V T V A
pt021080_POPTR_    L K L A S F F P P Q Q Q E S T K E T I Q C L P L L N R L T E K K T L K E E E D M E M Q E S T V G V K E E K I E K V T V A
 
AT1G08290.1     L Q I G F P K Y H R G S S E D G S D I T F D H Q K K P I K R E I I E D G V V M M K K R R K M K F D E - E I I D S D V E V
gm033191_Glyma1    L H I G L P D S N K G H A D E V D E K M I F H V K - - - - - - - - E E E E S S K R S F H G C S F N N Q E - - - - - - - -
pt021080_POPTR_    L H I G L P N S - - - - G D S G V E T G V F D I K - - - - - - - - - E E I S M K K N F Q G Y S F N S - E - - - - - - - -
 
AT1G08290.1     C G K R F W I P S P A Q I H V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G A D S L K G T I Q P A
gm033191_Glyma1    - - R R F W I P T P A Q I L V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G P D S L K G T - Q P A
pt021080_POPTR_    - - S R F W I P T P A Q I L V G P M Q F S C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G P D S L K G T - Q P A
 
AT1G08290.1     A I L R L P C Y C C A E G C K N N I N H P R S K P L K D F R T L Q T H Y K R K H G S K P F S C G K C G K A L A V K G D W
gm033191_Glyma1    A M L R L P C Y C C A Q G C K N N I N H P R A K P L K D F R T L Q T H Y K R K H G T K P F M C R K C G K T F A V K G D W
pt021080_POPTR_    A M L R L P C Y C C A Q G C K N N I N H P R A K P L K D F R T L Q T H Y K R K H G A K P F M C R K C S K A F A V K G D W
 
AT1G08290.1     R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G S G H S P H P S L L F D G F E E D T E C V T T E - - -
gm033191_Glyma1    R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G K G H N P H P P - - F E A F E D E K E C I T G S D E D
pt021080_POPTR_    R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G K G H S P H P S - - L E G F E D E K E C I T G S - E D
 
AT1G08290.1     - - - - - - -
gm033191_Glyma1    E V N A H H T
pt021080_POPTR_    E F - A H - -
 
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