fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp014462 not found in 390aa AT3G57670.1 1st_not 0.430014430 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08290.1     MNS-YETK-GLSFESP----SFIEWLKP----QSSTTSSKSVLYRGKTRDAISRSNHHQS
pp014462_Pp1s20 MSSRYNPQNSVAVAHPNIPTTFCEWLKPSQPGQPLSHYPVAIPYEGVYPGFATGSS----
                *.* *:.: .::.  *    :* *****    *. :  . :: *.*   .  : *.    

AT1G08290.1     QMNMLERSLFLYQPQEPLNTSIQCLPLLNKL-----------------------------
pp014462_Pp1s20 -----SESYFPVQPRSPAPVHRLQYPPADQYGYSCNSHQQSHDQFYNQQTRDEHEWRQRW
                     ..* *  **:.*  .     *  ::                              

AT1G08290.1     -MENNSQASDI-----------KEENKDDVVTLQIGFPKYHRGSSEDGSDITFDHQKKPI
pp014462_Pp1s20 HLQNNSMSSEPLPFLSLSPPTGRDDLSDSVMRTAILLPEASHASEESDENVTVALHIGPP
                 ::*** :*:            ::: .*.*:   * :*:  :.*.*...::*.  :  * 

AT1G08290.1     KREIIE-----------DGVVMMKKRRKMKFDEEIIDSDVEVCGKRFWIPSPAQIHVGPM
pp014462_Pp1s20 SSDAMSMSRSTESPSVYDSLSLAERERLQRGRGRLLEGE-------YWIPTPAQILVGPT
                . : :.           *.: : ::.*  :   .:::.:       :***:**** *** 

AT1G08290.1     QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNI
pp014462_Pp1s20 QFSCPVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGT-QPTAMLRLPCYCCAPGCRNNI
                **:*.:*.******************::***.:**:** **:*:********* **:***

AT1G08290.1     NHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSD
pp014462_Pp1s20 DHPRSKPLKDFRTLQTHYKRKHGIKPFMCRKCSKAFAVRGDWRTHEKNCGKLWFCTCGSD
                :********************** *** * **.**:**:**************:******

AT1G08290.1     FKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTECVTTE-----------
pp014462_Pp1s20 FKHKRSLKDHIRAFGNGHAAHG---MDSCEDEEDAVSEEDIDEEVSGGSQ
                ************:**.**:.*    :*. *:: :.*: *
BoxShade v3.31 C (beta, 970507) Output
AT1G08290.1     M N S - Y E T K - G L S F E S P - - - - S F I E W L K P - - - - Q S S T T S S K S V L Y R G K T R D A I S R S N H H Q S
pp014462_Pp1s20    M S S R Y N P Q N S V A V A H P N I P T T F C E W L K P S Q P G Q P L S H Y P V A I P Y E G V Y P G F A T G S S - - - -
 
AT1G08290.1     Q M N M L E R S L F L Y Q P Q E P L N T S I Q C L P L L N K L - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp014462_Pp1s20    - - - - - S E S Y F P V Q P R S P A P V H R L Q Y P P A D Q Y G Y S C N S H Q Q S H D Q F Y N Q Q T R D E H E W R Q R W
 
AT1G08290.1     - M E N N S Q A S D I - - - - - - - - - - - K E E N K D D V V T L Q I G F P K Y H R G S S E D G S D I T F D H Q K K P I
pp014462_Pp1s20    H L Q N N S M S S E P L P F L S L S P P T G R D D L S D S V M R T A I L L P E A S H A S E E S D E N V T V A L H I G P P
 
AT1G08290.1     K R E I I E - - - - - - - - - - - D G V V M M K K R R K M K F D E E I I D S D V E V C G K R F W I P S P A Q I H V G P M
pp014462_Pp1s20    S S D A M S M S R S T E S P S V Y D S L S L A E R E R L Q R G R G R L L E G E - - - - - - - Y W I P T P A Q I L V G P T
 
AT1G08290.1     Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G A D S L K G T I Q P A A I L R L P C Y C C A E G C K N N I
pp014462_Pp1s20    Q F S C P V C N K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T - Q P T A M L R L P C Y C C A P G C R N N I
 
AT1G08290.1     N H P R S K P L K D F R T L Q T H Y K R K H G S K P F S C G K C G K A L A V K G D W R T H E K N C G K L W Y C T C G S D
pp014462_Pp1s20    D H P R S K P L K D F R T L Q T H Y K R K H G I K P F M C R K C S K A F A V R G D W R T H E K N C G K L W F C T C G S D
 
AT1G08290.1     F K H K R S L K D H I R S F G S G H S P H P S L L F D G F E E D T E C V T T E - - - - - - - - - - -
pp014462_Pp1s20    F K H K R S L K D H I R A F G N G H A A H G - - - M D S C E D E E D A V S E E D I D E E V S G G S Q
 
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