fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020625 not found in 333aa AT1G08290.1 not_1st 0.544011544 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08290.1     --MNSY--ETKGLSFESPSFIEWLKPQS--STTSSKSVLYRGKTRDAISRSNHHQSQMNM
pt020625_POPTR_ MGLCNYHVEDKNLCFQAPNFIEWLKPSSSPSPSSSSSSLSNSSVTQQVQLTN----PMSV
                  : .*  * *.*.*::*.*******.*  *.:**.* * .... : :. :*     *.:

AT1G08290.1     LE-RSLF---LYQPQEPLNTSIQCLPLLNKLMENNSQAS---DIKE------ENKDDVVT
pt020625_POPTR_ LRLPSLFPQQQHQQREAMKETIQCLPLLSRFTEKKTLKDGDMEVKESTVGVKEEKEVTVA
                *.  ***    :* :*.:: :*******.:: *:::  .   ::**      *:*: .*:

AT1G08290.1     LQIGFPKYHRGSSEDGSDITFDHQKKPIKREIIE--DGVVMMKKRRKMKFDEEIIDSDVE
pt020625_POPTR_ LHIGLP--NSGDSE-------------VETEVLDLKEEISMKKNFQGYSFNSE-------
                *:**:*  : *.**             :: *:::  : : * *: :  .*:.*       

AT1G08290.1     VCGKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQP
pt020625_POPTR_ ---SRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGT-QP
                   .*****:**** ***********************************.****** **

AT1G08290.1     AAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGD
pt020625_POPTR_ AAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKTFAVKGD
                **:*********:**********:******************:*** * **.*::*****

AT1G08290.1     WRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEE-DTECVTTE-
pt020625_POPTR_ WRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSL--EGFEEIDKECITGSE
                **********************************.********  :**** *.**:* . 

AT1G08290.1     -----
pt020625_POPTR_ DEFAH
BoxShade v3.31 C (beta, 970507) Output
AT1G08290.1     - - M N S Y - - E T K G L S F E S P S F I E W L K P Q S - - S T T S S K S V L Y R G K T R D A I S R S N H H Q S Q M N M
pt020625_POPTR_    M G L C N Y H V E D K N L C F Q A P N F I E W L K P S S S P S P S S S S S S L S N S S V T Q Q V Q L T N - - - - P M S V
 
AT1G08290.1     L E - R S L F - - - L Y Q P Q E P L N T S I Q C L P L L N K L M E N N S Q A S - - - D I K E - - - - - - E N K D D V V T
pt020625_POPTR_    L R L P S L F P Q Q Q H Q Q R E A M K E T I Q C L P L L S R F T E K K T L K D G D M E V K E S T V G V K E E K E V T V A
 
AT1G08290.1     L Q I G F P K Y H R G S S E D G S D I T F D H Q K K P I K R E I I E - - D G V V M M K K R R K M K F D E E I I D S D V E
pt020625_POPTR_    L H I G L P - - N S G D S E - - - - - - - - - - - - - V E T E V L D L K E E I S M K K N F Q G Y S F N S E - - - - - - -
 
AT1G08290.1     V C G K R F W I P S P A Q I H V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G A D S L K G T I Q P
pt020625_POPTR_    - - - S R F W I P T P A Q I L V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G P D S L K G T - Q P
 
AT1G08290.1     A A I L R L P C Y C C A E G C K N N I N H P R S K P L K D F R T L Q T H Y K R K H G S K P F S C G K C G K A L A V K G D
pt020625_POPTR_    A A M L R L P C Y C C A Q G C K N N I N H P R A K P L K D F R T L Q T H Y K R K H G A K P F M C R K C S K T F A V K G D
 
AT1G08290.1     W R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G S G H S P H P S L L F D G F E E - D T E C V T T E -
pt020625_POPTR_    W R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G K G H S P H P S L - - E G F E E I D K E C I T G S E
 
AT1G08290.1     - - - - -
pt020625_POPTR_    D E F A H
 
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