fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021080 not found in 335aa AT1G08290.1 1st_1st 0.551226551 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08290.1     --MNSY--ETKGLSFESPSFIEWLKPQSSTTSSKSVLYRGKTRDAISRSNHHQSQ----M
pt021080_POPTR_ MGLRNYHVEDNNLCFQAPNFIEWLKPSSTSPSPSS---SSSSSSSLSSVSTQQVQLTNPM
                  :..*  * :.*.*::*.*******.*::.*..*    ..: .::*  . :* *    *

AT1G08290.1     NMLE-RSLFLYQPQEPLNTSIQCLPLLNKL-----------MENNSQASDIKEENKDDV-
pt021080_POPTR_ SILKLASFFPPQQQESTKETIQCLPLLNRLTEKKTLKEEEDMEMQESTVGVKEEKIEKVT
                .:*:  *:*  * **. : :********:*           ** :..: .:***: :.* 

AT1G08290.1     VTLQIGFPKYHRGSSEDGSDITFDHQKKPIKREIIEDGVVMMKKRRKMKFDEEIIDSDVE
pt021080_POPTR_ VALHIGLPNSGDSGVETG---VFD-----IKEEI-----SMKKNFQGYSFNSE-------
                *:*:**:*:   .. * *   .**     **.**      * *: :  .*:.*       

AT1G08290.1     VCGKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQP
pt021080_POPTR_ ---SRFWIPTPAQILVGPMQFSCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGT-QP
                   .*****:**** ******:****************************.****** **

AT1G08290.1     AAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGD
pt021080_POPTR_ AAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKAFAVKGD
                **:*********:**********:******************:*** * **.**:*****

AT1G08290.1     WRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTECVTTE--
pt021080_POPTR_ WRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSL--EGFEDEKECITGSED
                **********************************.********  :***::.**:* .  

AT1G08290.1     ----
pt021080_POPTR_ EFAH
BoxShade v3.31 C (beta, 970507) Output
AT1G08290.1     - - M N S Y - - E T K G L S F E S P S F I E W L K P Q S S T T S S K S V L Y R G K T R D A I S R S N H H Q S Q - - - - M
pt021080_POPTR_    M G L R N Y H V E D N N L C F Q A P N F I E W L K P S S T S P S P S S - - - S S S S S S S L S S V S T Q Q V Q L T N P M
 
AT1G08290.1     N M L E - R S L F L Y Q P Q E P L N T S I Q C L P L L N K L - - - - - - - - - - - M E N N S Q A S D I K E E N K D D V -
pt021080_POPTR_    S I L K L A S F F P P Q Q Q E S T K E T I Q C L P L L N R L T E K K T L K E E E D M E M Q E S T V G V K E E K I E K V T
 
AT1G08290.1     V T L Q I G F P K Y H R G S S E D G S D I T F D H Q K K P I K R E I I E D G V V M M K K R R K M K F D E E I I D S D V E
pt021080_POPTR_    V A L H I G L P N S G D S G V E T G - - - V F D - - - - - I K E E I - - - - - S M K K N F Q G Y S F N S E - - - - - - -
 
AT1G08290.1     V C G K R F W I P S P A Q I H V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G A D S L K G T I Q P
pt021080_POPTR_    - - - S R F W I P T P A Q I L V G P M Q F S C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G P D S L K G T - Q P
 
AT1G08290.1     A A I L R L P C Y C C A E G C K N N I N H P R S K P L K D F R T L Q T H Y K R K H G S K P F S C G K C G K A L A V K G D
pt021080_POPTR_    A A M L R L P C Y C C A Q G C K N N I N H P R A K P L K D F R T L Q T H Y K R K H G A K P F M C R K C S K A F A V K G D
 
AT1G08290.1     W R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G S G H S P H P S L L F D G F E E D T E C V T T E - -
pt021080_POPTR_    W R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G K G H S P H P S L - - E G F E D E K E C I T G S E D
 
AT1G08290.1     - - - -
pt021080_POPTR_    E F A H
 
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