fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026149 not found in 634aa AT3G20880.1 1st_not 0.421356421 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08290.1     ----MNSYETKGLSFE----SPSFIEWLKPQSSTTSSKSVLYRGKTRDAIS-----RSNH
Sb026149_Sorbi1 SSGSMGPRTCAAMEGEAVGGSP-FFQWLKPRRSSSPSSSRSSSGSSSSSSSTTMAASAGH
                    *..    .:. *    ** *::****: *::.*.*    *.: .: *      :.*

AT1G08290.1     H---------QSQMNMLERSLFLYQPQEPLN-TSIQCLPLLNKLMENNSQASD------I
Sb026149_Sorbi1 HVLAALGEEGQSAAGGV--------VQEAVRPSSMTCLPLLSRLGEGKGASDDHEQQCTV
                *         **  . :         **.:. :*: *****.:* *.:. :.*      :

AT1G08290.1     KEE---------NKDDV----VTLQIGFP-------------------------------
Sb026149_Sorbi1 KEEIMSGGGDGGATSDLAKSGVDLNIGLPVGGSCSIEDAIMEEKGDEEEEDDEVDQEAGE
                ***          ..*:    * *:**:*                               

AT1G08290.1     -------KYHRGSSEDGSDITFDHQKKPIKREII----------------EDGVVMMKKR
Sb026149_Sorbi1 DESEEWKHMHGGCKVEGMDL----QQEDDDREVVPSSVDGRSNNIVVGVGEFGVV-----
                       : * *.. :* *:    *::  .**::                * ***     

AT1G08290.1     RKMKFDEEIIDSDVEVCGKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGS
Sb026149_Sorbi1 -----GEE---SGLPIAGCQYWIPTPAQILIGPVQFICHVCNKTFNRYNNMQMHMWGHGR
                     .**   *.: :.* ::***:**** :**:** * :*.***************** 

AT1G08290.1     EFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKP
Sb026149_Sorbi1 EYRKGPESLKGT-QTLALLKLPCYCCAAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKP
                *:***.:***** *. *:*:******* *****: ***::*****************:**

AT1G08290.1     FSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLF
Sb026149_Sorbi1 FRCRRCAKPFAVKGDWRTHEKNCGKRWFCACGSDFKHKRSLNDHVRSFGADHGP------
                * * :*.*.:*************** *:*:***********:**:****:.*.*      

AT1G08290.1     DGFEEDTECVTTE---------
Sb026149_Sorbi1 --VDEPAAAAGAKDRIVRFHNR
                  .:* : .. ::
BoxShade v3.31 C (beta, 970507) Output
AT1G08290.1     - - - - M N S Y E T K G L S F E - - - - S P S F I E W L K P Q S S T T S S K S V L Y R G K T R D A I S - - - - - R S N H
Sb026149_Sorbi1    S S G S M G P R T C A A M E G E A V G G S P - F F Q W L K P R R S S S P S S S R S S S G S S S S S S S T T M A A S A G H
 
AT1G08290.1     H - - - - - - - - - Q S Q M N M L E R S L F L Y Q P Q E P L N - T S I Q C L P L L N K L M E N N S Q A S D - - - - - - I
Sb026149_Sorbi1    H V L A A L G E E G Q S A A G G V - - - - - - - - V Q E A V R P S S M T C L P L L S R L G E G K G A S D D H E Q Q C T V
 
AT1G08290.1     K E E - - - - - - - - - N K D D V - - - - V T L Q I G F P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026149_Sorbi1    K E E I M S G G G D G G A T S D L A K S G V D L N I G L P V G G S C S I E D A I M E E K G D E E E E D D E V D Q E A G E
 
AT1G08290.1     - - - - - - - K Y H R G S S E D G S D I T F D H Q K K P I K R E I I - - - - - - - - - - - - - - - - E D G V V M M K K R
Sb026149_Sorbi1    D E S E E W K H M H G G C K V E G M D L - - - - Q Q E D D D R E V V P S S V D G R S N N I V V G V G E F G V V - - - - -
 
AT1G08290.1     R K M K F D E E I I D S D V E V C G K R F W I P S P A Q I H V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S
Sb026149_Sorbi1    - - - - - G E E - - - S G L P I A G C Q Y W I P T P A Q I L I G P V Q F I C H V C N K T F N R Y N N M Q M H M W G H G R
 
AT1G08290.1     E F R K G A D S L K G T I Q P A A I L R L P C Y C C A E G C K N N I N H P R S K P L K D F R T L Q T H Y K R K H G S K P
Sb026149_Sorbi1    E Y R K G P E S L K G T - Q T L A L L K L P C Y C C A A G C K N N V A H P R A R P L K D F R T L Q T H Y K R K H G A K P
 
AT1G08290.1     F S C G K C G K A L A V K G D W R T H E K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G S G H S P H P S L L F
Sb026149_Sorbi1    F R C R R C A K P F A V K G D W R T H E K N C G K R W F C A C G S D F K H K R S L N D H V R S F G A D H G P - - - - - -
 
AT1G08290.1     D G F E E D T E C V T T E - - - - - - - - -
Sb026149_Sorbi1    - - V D E P A A A A G A K D R I V R F H N R
 
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