fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033191 not found in 323aa AT1G08290.1 1st_1st 0.535353535 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08290.1     -----MNSYETKGLSFESPSFIEWLKPQSSTTS----SKSVLYRGKTRDAISRSNHHQSQ
gm033191_Glyma1 MGLMECNVEDNKNLYLHAPTFIEWLKPCSSPNSYLNNSNTISYS-------SSSSPSSSS
                      *  :.*.* :.:*:******* **..*    *::: *        * *.  .*.

AT1G08290.1     MNMLERSLFLYQPQEPLNTSIQCLPLLN-KLMENNSQASDIKEENKDDV-VTLQIGFPKY
gm033191_Glyma1 FSLTQ--------NEFVQETIQFLPILSEKASKDEDQSFEVKEEKVEQVTVALHIGLPDS
                :.: :        :* :: :** **:*. *  :::.*: ::***: ::* *:*:**:*. 

AT1G08290.1     HRGSSEDGSDITFDHQKKPIKREIIEDGVVMMKKRRKMKFDEEIIDSDVEVCG-----KR
gm033191_Glyma1 NKGHADEVDEKMIFHVKE----------------------EEESSKRSFHGCSFNNQERR
                ::* ::: .:  : * *:                      :**  . ... *.     :*

AT1G08290.1     FWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILR
gm033191_Glyma1 FWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGT-QPAAMLR
                ****:**** ***********************************.****** ****:**

AT1G08290.1     LPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHE
gm033191_Glyma1 LPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHE
                *******:**********:******************:*** * ****::**********

AT1G08290.1     KNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTECVTTE-------
gm033191_Glyma1 KNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHNPHPP--FEAFEDEKECITGSDEDEVNA
                *****************************.**.***.  *:.**::.**:* .       

AT1G08290.1     ---
gm033191_Glyma1 HHT
BoxShade v3.31 C (beta, 970507) Output
AT1G08290.1     - - - - - M N S Y E T K G L S F E S P S F I E W L K P Q S S T T S - - - - S K S V L Y R G K T R D A I S R S N H H Q S Q
gm033191_Glyma1    M G L M E C N V E D N K N L Y L H A P T F I E W L K P C S S P N S Y L N N S N T I S Y S - - - - - - - S S S S P S S S S
 
AT1G08290.1     M N M L E R S L F L Y Q P Q E P L N T S I Q C L P L L N - K L M E N N S Q A S D I K E E N K D D V - V T L Q I G F P K Y
gm033191_Glyma1    F S L T Q - - - - - - - - N E F V Q E T I Q F L P I L S E K A S K D E D Q S F E V K E E K V E Q V T V A L H I G L P D S
 
AT1G08290.1     H R G S S E D G S D I T F D H Q K K P I K R E I I E D G V V M M K K R R K M K F D E E I I D S D V E V C G - - - - - K R
gm033191_Glyma1    N K G H A D E V D E K M I F H V K E - - - - - - - - - - - - - - - - - - - - - - E E E S S K R S F H G C S F N N Q E R R
 
AT1G08290.1     F W I P S P A Q I H V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G A D S L K G T I Q P A A I L R
gm033191_Glyma1    F W I P T P A Q I L V G P M Q F A C S I C S K T F N R Y N N M Q M H M W G H G S E F R K G P D S L K G T - Q P A A M L R
 
AT1G08290.1     L P C Y C C A E G C K N N I N H P R S K P L K D F R T L Q T H Y K R K H G S K P F S C G K C G K A L A V K G D W R T H E
gm033191_Glyma1    L P C Y C C A Q G C K N N I N H P R A K P L K D F R T L Q T H Y K R K H G T K P F M C R K C G K T F A V K G D W R T H E
 
AT1G08290.1     K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G S G H S P H P S L L F D G F E E D T E C V T T E - - - - - - -
gm033191_Glyma1    K N C G K L W Y C T C G S D F K H K R S L K D H I R S F G K G H N P H P P - - F E A F E D E K E C I T G S D E D E V N A
 
AT1G08290.1     - - -
gm033191_Glyma1    H H T
 
0