fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os027003 not found in 169aa AT1G08465.1 1st_1st 0.452879581 Ia
Gm034118 not found in 181aa AT1G08465.1 1st_1st 0.607329842 Ia
Pt029907 not found in 206aa AT1G08465.1 1st_1st 0.494764397 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08465.1     -----MS-----------------VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVR
gm034118_Glyma1 MSMDMMA---------------------TERVCYVHCNFCNTTLAVSVPCSSLLTIVTVR
pt029907_POPTR_ ----MLARVLLKFEANYTFGSIQVISCDNTRRAFLSC-FTNSSWQVSVPSSSLFNIVTVR
Os027003_Os07t0 -----MS-----------------VQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVR
                     ::                     . : .:: * : .:   *.**  .  .:****

AT1G08465.1     CGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQH-TTSLVTRKDCASSSRSTNN-LSENI
gm034118_Glyma1 CGHCANLLTVNMGASLQTF---PSQDTTQLQRQHLSVQEACSKELGSSSKCKSF---ETV
pt029907_POPTR_ CGHCGNLLSVNMGASLQTL---PLQDP---QKLLLINSEDLNKNFGSSSKCNKVTASEST
Os027003_Os07t0 CGHCTMVLSMDLA---------PFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTA
                ****  :*::::.         * ::    :           :: .* . ..     .. 

AT1G08465.1     DRE-AP----RMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWA
gm034118_Glyma1 DHEQQP----RIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWA
pt029907_POPTR_ EHE-PP----RMPAIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWA
Os027003_Os07t0 MYP-MPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWA
                     *    ::..**************************:.**:********:******

AT1G08465.1     HFPHIHFGLKLDGNKKGKQLDQ-SVAG---QKSNGYY------
gm034118_Glyma1 HFPHIHFGLKLDGNKQAK-LDQ----GDGTQKSNGFY------
pt029907_POPTR_ HFPHIHFGLKLDSNKHAK-LDHQSFAGEGTQKTSGLYEINGSL
Os027003_Os07t0 HLPRLHFGLSV--------AD-----GGGGGGSN---------
                *:*::****.:         *     *     :.
BoxShade v3.31 C (beta, 970507) Output
AT1G08465.1     - - - - - M S - - - - - - - - - - - - - - - - - V D F S S E R V C Y V H C S F C T T I L A V S V P Y A S L F T L V T V R
gm034118_Glyma1    M S M D M M A - - - - - - - - - - - - - - - - - - - - - T E R V C Y V H C N F C N T T L A V S V P C S S L L T I V T V R
pt029907_POPTR_    - - - - M L A R V L L K F E A N Y T F G S I Q V I S C D N T R R A F L S C - F T N S S W Q V S V P S S S L F N I V T V R
Os027003_Os07t0    - - - - - M S - - - - - - - - - - - - - - - - - V Q F T S E H V C Y V N C N Y C N T I L V V N V P N N C S Y N I V T V R
 
AT1G08465.1     C G H C T N L L S L N I G V S L H Q T S A P P I H Q D L Q P H R Q H - T T S L V T R K D C A S S S R S T N N - L S E N I
gm034118_Glyma1    C G H C A N L L T V N M G A S L Q T F - - - P S Q D T T Q L Q R Q H L S V Q E A C S K E L G S S S K C K S F - - - E T V
pt029907_POPTR_    C G H C G N L L S V N M G A S L Q T L - - - P L Q D P - - - Q K L L L I N S E D L N K N F G S S S K C N K V T A S E S T
Os027003_Os07t0    C G H C T M V L S M D L A - - - - - - - - - P F H Q A R T V Q D H Q V Q N R G F Q G N N F G S Y D I A S R N Q R T S T A
 
AT1G08465.1     D R E - A P - - - - R M P P I R P P E K R Q R V P S A Y N R F I K E E I Q R I K A C N P E I S H R E A F S T A A K N W A
gm034118_Glyma1    D H E Q Q P - - - - R I P P I R P P E K R Q R V P S A Y N R F I K E E I Q R I K A S N P D I S H R E A F S T A A K N W A
pt029907_POPTR_    E H E - P P - - - - R M P A I R P P E K R Q R V P S A Y N R F I K E E I Q R I K A S N P D I S H R E A F S T A A K N W A
Os027003_Os07t0    M Y P - M P T S Q Q Q V S P I R P P E K R Q R V P S A Y N R F I K E E I Q R I K T S N P E I S H R E A F S A A A K N W A
 
AT1G08465.1     H F P H I H F G L K L D G N K K G K Q L D Q - S V A G - - - Q K S N G Y Y - - - - - -
gm034118_Glyma1    H F P H I H F G L K L D G N K Q A K - L D Q - - - - G D G T Q K S N G F Y - - - - - -
pt029907_POPTR_    H F P H I H F G L K L D S N K H A K - L D H Q S F A G E G T Q K T S G L Y E I N G S L
Os027003_Os07t0    H L P R L H F G L S V - - - - - - - - A D - - - - - G G G G G G S N - - - - - - - - -
 
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