fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029907 not found in 206aa AT1G08465.1 1st_1st 0.494764397 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08465.1     --------------------MSVDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCG
pt029907_POPTR_ MLARVLLKFEANYTFGSIQVISCD--NTRRAFLSC-FTNSSWQVSVPSSSLFNIVTVRCG
                                    :* *  . * .:: * * .:   **** :***.:******

AT1G08465.1     HCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVTRKDC----ASSSRSTN-NLSEN
pt029907_POPTR_ HCGNLLSVNMGASLQTL---PL-QDPQ-----KLLLINSEDLNKNFGSSSKCNKVTASES
                ** ****:*:*.**:     *: ** *     .  *:. :*     .***:..: . **.

AT1G08465.1     IDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPH
pt029907_POPTR_ TEHEPPRMPAIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPH
                 ::*.****.***************************.**:*******************

AT1G08465.1     IHFGLKLDGNKKGKQLDQSVAG---QKSNGYY------
pt029907_POPTR_ IHFGLKLDSNKHAKLDHQSFAGEGTQKTSGLYEINGSL
                ********.**:.*  .**.**   **:.* *
BoxShade v3.31 C (beta, 970507) Output
AT1G08465.1     - - - - - - - - - - - - - - - - - - - - M S V D F S S E R V C Y V H C S F C T T I L A V S V P Y A S L F T L V T V R C G
pt029907_POPTR_    M L A R V L L K F E A N Y T F G S I Q V I S C D - - N T R R A F L S C - F T N S S W Q V S V P S S S L F N I V T V R C G
 
AT1G08465.1     H C T N L L S L N I G V S L H Q T S A P P I H Q D L Q P H R Q H T T S L V T R K D C - - - - A S S S R S T N - N L S E N
pt029907_POPTR_    H C G N L L S V N M G A S L Q T L - - - P L - Q D P Q - - - - - K L L L I N S E D L N K N F G S S S K C N K V T A S E S
 
AT1G08465.1     I D R E A P R M P P I R P P E K R Q R V P S A Y N R F I K E E I Q R I K A C N P E I S H R E A F S T A A K N W A H F P H
pt029907_POPTR_    T E H E P P R M P A I R P P E K R Q R V P S A Y N R F I K E E I Q R I K A S N P D I S H R E A F S T A A K N W A H F P H
 
AT1G08465.1     I H F G L K L D G N K K G K Q L D Q S V A G - - - Q K S N G Y Y - - - - - -
pt029907_POPTR_    I H F G L K L D S N K H A K L D H Q S F A G E G T Q K T S G L Y E I N G S L
 
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