fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029907 not found in 206aa AT1G08465.1 1st_1st 0.494764397 Ia
Pt033007 not found in 214aa AT2G45190.1 not_not 0.460732984 III
Pt005407 not found in 188aa AT2G26580.2 not_not 0.458115183 III
Pt009491 not found in 188aa AT2G26580.2 not_not 0.455497382 III
Pt010908 MSSSSTLSLDLLPSSE in 6/213 AT2G45190.1 not_not 0.452879581 III
Pt016250 not found in 212aa AT2G45190.1 not_not 0.445026178 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08465.1     --------------------MSVDF--SSERVCYVHCSFCTTILAVSVPYASLFTLVTVR
pt005407_POPTR_ --------------MSS----CIDAVP-NEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVR
pt009491_POPTR_ --------------MSS----CVDVVP-HEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVR
pt033007_POPTR_ --------------MSSSSSLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVR
pt029907_POPTR_ MLARVLLKFEANYTFGSIQVISCD----NTRRAFLSC-FTNSSWQVSVPSSSLFNIVTVR
pt010908_POPTR_ --------------MSSSSTLSLDLLPSSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVR
pt016250_POPTR_ -------------MASSSAAFSPDHLSSSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVR
                                     . *      : .:: * :      **** :.**  ****

AT1G08465.1     CGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVTRKDC----------------
pt005407_POPTR_ CGHCTNIWSVNMAAAFQSLSW----QDQV-----QASNYNSHDYRID------------L
pt009491_POPTR_ CGHCTNLWSVNMAAAFQSLSW----QDHV-----QASNHISHDYRID------------M
pt033007_POPTR_ CGHCTNLLPVNMRGLFLPSAS----QFPL-----GHNLYSPSHNLLD-DQIPNPTPNFLI
pt029907_POPTR_ CGHCGNLLSVNMGASLQTL---PL-QDPQ-----KLLLINSEDLNKN------------F
pt010908_POPTR_ CGHCTNLLPVNMRGLLLPSAN----QFHL-----GHSFFSPSHNLL--DEIPNPTPNFLI
pt016250_POPTR_ CGHCTNLFSVNMRSL-LPAAN----QFYL-----GHGFFNPQINILEGMRSTGAPPSLMI
                **** *: .:*:             *                                  

AT1G08465.1     ASSSRSTN--NLSENIDREAPRMPPI-RPPEKRQRVPSAYNRFIKEEIQRIKACNPEISH
pt005407_POPTR_ GSSSKCNNKISMRTPAANIVTQERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISH
pt009491_POPTR_ GSSSKFNNKISTRTPATNIVTQERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISH
pt033007_POPTR_ NQTHVNDFSVTVRGMADHELPRPPVIHRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH
pt029907_POPTR_ GSSSKCNK-VTASESTEHEPPRMPAI-RPPEKRQRVPSAYNRFIKEEIQRIKASNPDISH
pt010908_POPTR_ NQTNVNDFSVPVRGMADHELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH
pt016250_POPTR_ NQPNPNESVMPIRGV--EEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH
                 ..              .  .:   : **************:***:******* **:***

AT1G08465.1     REAFSTAAKNWAHFPHIHFGLKLD---GNKKGKQLDQSVAG----------QKSNGYY--
pt005407_POPTR_ REAFSTAAKNWAHFPHIHFGLMLE---TNNQTKVDD----GSEKRLMSRSALQNN-----
pt009491_POPTR_ REAFSTAAKNWAHFPHIQFGLMLE---TNNQAKLDD----GSDKHLMSRSALLNN-----
pt033007_POPTR_ REAFSAAAKNWAHFPHIHFGLMPDQAMKKNNVRQQE----GED-------VLINDGFFAS
pt029907_POPTR_ REAFSTAAKNWAHFPHIHFGLKLD---SNKHAKLDHQSFAGEG-------TQKTSGLYE-
pt010908_POPTR_ REAFSAAAKNWAHFPHIHFGLMPDQMVKKTNVRQQE----GED-------VLMKDGFFSS
pt016250_POPTR_ REAFSAAAKNWAHFPHIHFGLMPDQPVKKTNVRQQE----GED-------VLMKDGFFAP
                *****:***********:***  :    :.: :  .    *            ..     

AT1G08465.1     ---------
pt005407_POPTR_ ---------
pt009491_POPTR_ ---------
pt033007_POPTR_ SNVGVTTPY
pt029907_POPTR_ INGSL----
pt010908_POPTR_ ANAGVPTPY
pt016250_POPTR_ ANVGV-TPY
BoxShade v3.31 C (beta, 970507) Output
AT1G08465.1     - - - - - - - - - - - - - - - - - - - - M S V D F - - S S E R V C Y V H C S F C T T I L A V S V P Y A S L F T L V T V R
pt005407_POPTR_    - - - - - - - - - - - - - - M S S - - - - C I D A V P - N E Q L C Y I P C N F C N I V L A V S V P C S S L F D I V T V R
pt009491_POPTR_    - - - - - - - - - - - - - - M S S - - - - C V D V V P - H E Q L C Y I P C N F C N I V L A V S V P C S N L F D I V T V R
pt033007_POPTR_    - - - - - - - - - - - - - - M S S S S S L S L D H L P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R
pt029907_POPTR_    M L A R V L L K F E A N Y T F G S I Q V I S C D - - - - N T R R A F L S C - F T N S S W Q V S V P S S S L F N I V T V R
pt010908_POPTR_    - - - - - - - - - - - - - - M S S S S T L S L D L L P S S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R
pt016250_POPTR_    - - - - - - - - - - - - - M A S S S A A F S P D H L S S S D Q L C Y V H C N F C D T V L A V S V P C S S L F K T V T V R
 
AT1G08465.1     C G H C T N L L S L N I G V S L H Q T S A P P I H Q D L Q P H R Q H T T S L V T R K D C - - - - - - - - - - - - - - - -
pt005407_POPTR_    C G H C T N I W S V N M A A A F Q S L S W - - - - Q D Q V - - - - - Q A S N Y N S H D Y R I D - - - - - - - - - - - - L
pt009491_POPTR_    C G H C T N L W S V N M A A A F Q S L S W - - - - Q D H V - - - - - Q A S N H I S H D Y R I D - - - - - - - - - - - - M
pt033007_POPTR_    C G H C T N L L P V N M R G L F L P S A S - - - - Q F P L - - - - - G H N L Y S P S H N L L D - D Q I P N P T P N F L I
pt029907_POPTR_    C G H C G N L L S V N M G A S L Q T L - - - P L - Q D P Q - - - - - K L L L I N S E D L N K N - - - - - - - - - - - - F
pt010908_POPTR_    C G H C T N L L P V N M R G L L L P S A N - - - - Q F H L - - - - - G H S F F S P S H N L L - - D E I P N P T P N F L I
pt016250_POPTR_    C G H C T N L F S V N M R S L - L P A A N - - - - Q F Y L - - - - - G H G F F N P Q I N I L E G M R S T G A P P S L M I
 
AT1G08465.1     A S S S R S T N - - N L S E N I D R E A P R M P P I - R P P E K R Q R V P S A Y N R F I K E E I Q R I K A C N P E I S H
pt005407_POPTR_    G S S S K C N N K I S M R T P A A N I V T Q E R V V N R P P E K R Q R V P S A Y N Q F I K E E I Q R I K A N N P D I S H
pt009491_POPTR_    G S S S K F N N K I S T R T P A T N I V T Q E R V V N R P P E K R Q R V P S A Y N Q F I K E E I Q R I K A N N P E I S H
pt033007_POPTR_    N Q T H V N D F S V T V R G M A D H E L P R P P V I H R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H
pt029907_POPTR_    G S S S K C N K - V T A S E S T E H E P P R M P A I - R P P E K R Q R V P S A Y N R F I K E E I Q R I K A S N P D I S H
pt010908_POPTR_    N Q T N V N D F S V P V R G M A D H E L P R P P V I N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H
pt016250_POPTR_    N Q P N P N E S V M P I R G V - - E E I P K P P V V N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H
 
AT1G08465.1     R E A F S T A A K N W A H F P H I H F G L K L D - - - G N K K G K Q L D Q S V A G - - - - - - - - - - Q K S N G Y Y - -
pt005407_POPTR_    R E A F S T A A K N W A H F P H I H F G L M L E - - - T N N Q T K V D D - - - - G S E K R L M S R S A L Q N N - - - - -
pt009491_POPTR_    R E A F S T A A K N W A H F P H I Q F G L M L E - - - T N N Q A K L D D - - - - G S D K H L M S R S A L L N N - - - - -
pt033007_POPTR_    R E A F S A A A K N W A H F P H I H F G L M P D Q A M K K N N V R Q Q E - - - - G E D - - - - - - - V L I N D G F F A S
pt029907_POPTR_    R E A F S T A A K N W A H F P H I H F G L K L D - - - S N K H A K L D H Q S F A G E G - - - - - - - T Q K T S G L Y E -
pt010908_POPTR_    R E A F S A A A K N W A H F P H I H F G L M P D Q M V K K T N V R Q Q E - - - - G E D - - - - - - - V L M K D G F F S S
pt016250_POPTR_    R E A F S A A A K N W A H F P H I H F G L M P D Q P V K K T N V R Q Q E - - - - G E D - - - - - - - V L M K D G F F A P
 
AT1G08465.1     - - - - - - - - -
pt005407_POPTR_    - - - - - - - - -
pt009491_POPTR_    - - - - - - - - -
pt033007_POPTR_    S N V G V T T P Y
pt029907_POPTR_    I N G S L - - - -
pt010908_POPTR_    A N A G V P T P Y
pt016250_POPTR_    A N V G V - T P Y
 
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