fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os027003 not found in 169aa AT1G08465.1 1st_1st 0.452879581 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08465.1     MSVDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAP
Os027003_Os07t0 MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLA---------
                ***:*:**:****:*.:*.***.*.**  . :.:********* :**:::.         

AT1G08465.1     PIHQ--DLQPHRQHTTSLVTRK----DCASSSRSTNNLSENIDREAPRMPPIRPPEKRQR
Os027003_Os07t0 PFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQR
                *:**   :* *: :. .:  .:    * ** .: *..    :  .  ::.**********

AT1G08465.1     VPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKL-DGNKKGKQLDQ
Os027003_Os07t0 VPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGG--------
                *****************:.***********:*******:*::****.: **.        

AT1G08465.1     SVAGQKSNGYY
Os027003_Os07t0 --GGGGSN---
                  .*  **
BoxShade v3.31 C (beta, 970507) Output
AT1G08465.1     M S V D F S S E R V C Y V H C S F C T T I L A V S V P Y A S L F T L V T V R C G H C T N L L S L N I G V S L H Q T S A P
Os027003_Os07t0    M S V Q F T S E H V C Y V N C N Y C N T I L V V N V P N N C S Y N I V T V R C G H C T M V L S M D L A - - - - - - - - -
 
AT1G08465.1     P I H Q - - D L Q P H R Q H T T S L V T R K - - - - D C A S S S R S T N N L S E N I D R E A P R M P P I R P P E K R Q R
Os027003_Os07t0    P F H Q A R T V Q D H Q V Q N R G F Q G N N F G S Y D I A S R N Q R T S T A M Y P M P T S Q Q Q V S P I R P P E K R Q R
 
AT1G08465.1     V P S A Y N R F I K E E I Q R I K A C N P E I S H R E A F S T A A K N W A H F P H I H F G L K L - D G N K K G K Q L D Q
Os027003_Os07t0    V P S A Y N R F I K E E I Q R I K T S N P E I S H R E A F S A A A K N W A H L P R L H F G L S V A D G G - - - - - - - -
 
AT1G08465.1     S V A G Q K S N G Y Y
Os027003_Os07t0    - - G G G G S N - - -
 
0