fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031935 not found in 385aa AT2G26580.2 1st_not 0.460732984 II
Sb022660 not found in 280aa AT1G08465.1 not_1st 0.455497382 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08465.1     --------------------------MSVDFSS------ERVCYVHCSFCTTILAVSVPY
Sb022660_Sorbi1 LCFASSLPPSRSRLHGDGGYLEIEEKMSAQFAS------EHACYVNCNYCNTILVVNVPN
Sb031935_Sorbi1 ---------------------------SEGMSSAQIAPADHVCYVHCNFCNTVLAVSVPG
                                           *  ::*      ::.***:*.:*.*:*.*.** 

AT1G08465.1     ASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVTRKDC-----A
Sb022660_Sorbi1 SCSHNIVTVKCGHCTMVLSMDLSPFHQQARTVPDNQVVQNRGFQYNNFGSYEQA------
Sb031935_Sorbi1 NSMLNIVTVRCGHCTNLLSVNLRALMH--SLPEQDQLQENIKVHGVNGTLHDQCGHLELG
                 .  .:***:***** :**:::    :       .*  :    :  .    .:.      

AT1G08465.1     SSSRSTNNL-------SENIDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPE
Sb022660_Sorbi1 --SSRNLRTPSMYS-----VSNNQPQVPPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPE
Sb031935_Sorbi1 SSSSSKFRLPMMYSPQNEHLLQEQT-LNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPD
                  *  . .           : .: . :   *********************:***: **:

AT1G08465.1     ISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQL-DQSVAG----QKSNGYY
Sb022660_Sorbi1 ISHREAFSAAAKNWAHLPRLHFGLSVADGGGGSN-------------------
Sb031935_Sorbi1 ISHREAFSTAAKNWAHYPNIHFGLN-SGREGGKKLVDEAVAAAPAPKKIQGFY
                ********:******* *.:****.  .   *.:
BoxShade v3.31 C (beta, 970507) Output
AT1G08465.1     - - - - - - - - - - - - - - - - - - - - - - - - - - M S V D F S S - - - - - - E R V C Y V H C S F C T T I L A V S V P Y
Sb022660_Sorbi1    L C F A S S L P P S R S R L H G D G G Y L E I E E K M S A Q F A S - - - - - - E H A C Y V N C N Y C N T I L V V N V P N
Sb031935_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - S E G M S S A Q I A P A D H V C Y V H C N F C N T V L A V S V P G
 
AT1G08465.1     A S L F T L V T V R C G H C T N L L S L N I G V S L H Q T S A P P I H Q D L Q P H R Q H T T S L V T R K D C - - - - - A
Sb022660_Sorbi1    S C S H N I V T V K C G H C T M V L S M D L S P F H Q Q A R T V P D N Q V V Q N R G F Q Y N N F G S Y E Q A - - - - - -
Sb031935_Sorbi1    N S M L N I V T V R C G H C T N L L S V N L R A L M H - - S L P E Q D Q L Q E N I K V H G V N G T L H D Q C G H L E L G
 
AT1G08465.1     S S S R S T N N L - - - - - - - S E N I D R E A P R M P P I R P P E K R Q R V P S A Y N R F I K E E I Q R I K A C N P E
Sb022660_Sorbi1    - - S S R N L R T P S M Y S - - - - - V S N N Q P Q V P P I R P P E K R Q R V P S A Y N R F I K E E I Q R I K T S N P E
Sb031935_Sorbi1    S S S S S K F R L P M M Y S P Q N E H L L Q E Q T - L N N A R P P E K R Q R V P S A Y N R F I K E E I R R I K A N N P D
 
AT1G08465.1     I S H R E A F S T A A K N W A H F P H I H F G L K L D G N K K G K Q L - D Q S V A G - - - - Q K S N G Y Y
Sb022660_Sorbi1    I S H R E A F S A A A K N W A H L P R L H F G L S V A D G G G G S N - - - - - - - - - - - - - - - - - - -
Sb031935_Sorbi1    I S H R E A F S T A A K N W A H Y P N I H F G L N - S G R E G G K K L V D E A V A A A P A P K K I Q G F Y
 
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