fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046764 not found in 186aa AT2G26580.2 not_not 0.473821989 III
Gm036154 not found in 186aa AT2G26580.2 not_not 0.465968586 III
Gm047022 not found in 215aa AT2G45190.1 not_not 0.452879581 III
Gm001387 not found in 215aa AT2G45190.1 not_not 0.447643979 III
Gm011376 not found in 214aa AT2G45190.1 not_not 0.445026178 III
Gm006033 not found in 216aa AT2G45190.1 not_not 0.445026178 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08465.1     -------MSVD----FSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLN
gm001387_Glyma0 MSSSSTSFSPD-QHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVN
gm006033_Glyma0 MSSSSTSFSPDQQHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKNVTVRCGHCTNLLSVN
gm036154_Glyma1 MSS----CSID----VAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVN
gm046764_Glyma1 MSS----CSID----VAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVN
gm047022_Glyma1 MSSSSSTLSLD--HLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVN
gm011376_Glyma0 MSSSSTTLSLD--HLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVN
                        * *     ..:::**: *.:*  :****** :***  *********** .:*

AT1G08465.1     I---------GVSLHQTSAPPIHQDLQPHRQ-HTTSLVTRKDCASSSRSTNNLSENIDR-
gm001387_Glyma0 MRGLLLPSANQLHLGHSFFTP-QNLLEEIRNAPSTNMMMNQ-----LPNPNDLVMSTMRG
gm006033_Glyma0 MRGLLLPSANQLHLGHTFFTP-QNLMEEIRNAPSTNIMMNQ-----LPNPNDLVMSTMRG
gm036154_Glyma1 M-------------AAAFQSLSWQDVQGSGH-CNPEYRIDTG--STSKCNNRIAM---RA
gm046764_Glyma1 M-------------AAAFQSLSWQDVQGPGQ-CNPEYRIDTG--STSKCNNRIAM---RA
gm047022_Glyma1 MRGLLMPSPTQFHLGHSFFSPSHNLLEEIPN-PTPNFLMNQT---NFSASHEFSMPA-RT
gm011376_Glyma0 MRGLLMPSPTQFHLGHSFFSPSHNLLEEIPN-PSPNFLMNQT---NLSASNEFSMPA-RI
                :               :  .   : ::   :  ...              : :     * 

AT1G08465.1     ---EAPRMPPI--RPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHF
gm001387_Glyma0 GPEETPK-PPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHF
gm006033_Glyma0 GPEETPK-PPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHF
gm036154_Glyma1 PTTHVTE-ERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHF
gm046764_Glyma1 PTTHVTE-ERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHF
gm047022_Glyma1 AADELPR-PPITNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHF
gm011376_Glyma0 AADELPR--PIMNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHF
                   . ..      **************:***:******: **:*:******:********

AT1G08465.1     PHIHFGLKLDGN--KKG---KQLDQSVAGQK---SNGYY----------
gm001387_Glyma0 PHIHFGLMPDNQPVKKANV-RQEAEDVLMK-----DGFFAPANVGVSPY
gm006033_Glyma0 PHIHFGLMPDNQPVKKANV-RQEAEDVLMK-----DGFFAPANVGVSPY
gm036154_Glyma1 PHIHFGLMLESNNQVKM---ENVSEKHLMSRAALLNK------------
gm046764_Glyma1 PHIHFGLMLESNNQAKM---DNVSEKHLMPRAALLNK------------
gm047022_Glyma1 PHIHFGLMPD-QTVKKTNVCQQDGEEVLMK-----DGFYASANVGVSPY
gm011376_Glyma0 PHIHFGLMPD-QTVKKTNVCQQEGEEVLMK-----DGFYASANVGVSPY
                *******  : :   *     :  :.         :
BoxShade v3.31 C (beta, 970507) Output
AT1G08465.1     - - - - - - - M S V D - - - - F S S E R V C Y V H C S F C T T I L A V S V P Y A S L F T L V T V R C G H C T N L L S L N
gm001387_Glyma0    M S S S S T S F S P D - Q H L S P S D Q L C Y V H C N F C D T V L A V S V P C T S L F K T V T V R C G H C T N L L S V N
gm006033_Glyma0    M S S S S T S F S P D Q Q H L S P S D Q L C Y V H C N F C D T V L A V S V P C T S L F K N V T V R C G H C T N L L S V N
gm036154_Glyma1    M S S - - - - C S I D - - - - V A P E Q L C Y I P C N F C N I V L A V S V P C S S L F D I V T V R C G H C T N L W S V N
gm046764_Glyma1    M S S - - - - C S I D - - - - V A P E Q L C Y I P C N F C N I V L A V S V P C S S L F D I V T V R C G H C T N L W S V N
gm047022_Glyma1    M S S S S S T L S L D - - H L P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G H C T N L L P V N
gm011376_Glyma0    M S S S S T T L S L D - - H L P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G H C T N L L P V N
 
AT1G08465.1     I - - - - - - - - - G V S L H Q T S A P P I H Q D L Q P H R Q - H T T S L V T R K D C A S S S R S T N N L S E N I D R -
gm001387_Glyma0    M R G L L L P S A N Q L H L G H S F F T P - Q N L L E E I R N A P S T N M M M N Q - - - - - L P N P N D L V M S T M R G
gm006033_Glyma0    M R G L L L P S A N Q L H L G H T F F T P - Q N L M E E I R N A P S T N I M M N Q - - - - - L P N P N D L V M S T M R G
gm036154_Glyma1    M - - - - - - - - - - - - - A A A F Q S L S W Q D V Q G S G H - C N P E Y R I D T G - - S T S K C N N R I A M - - - R A
gm046764_Glyma1    M - - - - - - - - - - - - - A A A F Q S L S W Q D V Q G P G Q - C N P E Y R I D T G - - S T S K C N N R I A M - - - R A
gm047022_Glyma1    M R G L L M P S P T Q F H L G H S F F S P S H N L L E E I P N - P T P N F L M N Q T - - - N F S A S H E F S M P A - R T
gm011376_Glyma0    M R G L L M P S P T Q F H L G H S F F S P S H N L L E E I P N - P S P N F L M N Q T - - - N L S A S N E F S M P A - R I
 
AT1G08465.1     - - - E A P R M P P I - - R P P E K R Q R V P S A Y N R F I K E E I Q R I K A C N P E I S H R E A F S T A A K N W A H F
gm001387_Glyma0    G P E E T P K - P P S A N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F
gm006033_Glyma0    G P E E T P K - P P S A N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F
gm036154_Glyma1    P T T H V T E - E R V V N R P P E K R Q R V P S A Y N Q F I K E E I Q R I K A N N P D I S H R E A F S T A A K N W A H F
gm046764_Glyma1    P T T H V T E - E R V V N R P P E K R Q R V P S A Y N Q F I K E E I Q R I K A N N P D I S H R E A F S T A A K N W A H F
gm047022_Glyma1    A A D E L P R - P P I T N R P P E K R Q R V P S A Y N R F I K D E I Q R I K S V N P D I T H R E A F S A A A K N W A H F
gm011376_Glyma0    A A D E L P R - - P I M N R P P E K R Q R V P S A Y N R F I K D E I Q R I K S V N P D I T H R E A F S A A A K N W A H F
 
AT1G08465.1     P H I H F G L K L D G N - - K K G - - - K Q L D Q S V A G Q K - - - S N G Y Y - - - - - - - - - -
gm001387_Glyma0    P H I H F G L M P D N Q P V K K A N V - R Q E A E D V L M K - - - - - D G F F A P A N V G V S P Y
gm006033_Glyma0    P H I H F G L M P D N Q P V K K A N V - R Q E A E D V L M K - - - - - D G F F A P A N V G V S P Y
gm036154_Glyma1    P H I H F G L M L E S N N Q V K M - - - E N V S E K H L M S R A A L L N K - - - - - - - - - - - -
gm046764_Glyma1    P H I H F G L M L E S N N Q A K M - - - D N V S E K H L M P R A A L L N K - - - - - - - - - - - -
gm047022_Glyma1    P H I H F G L M P D - Q T V K K T N V C Q Q D G E E V L M K - - - - - D G F Y A S A N V G V S P Y
gm011376_Glyma0    P H I H F G L M P D - Q T V K K T N V C Q Q E G E E V L M K - - - - - D G F Y A S A N V G V S P Y
 
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