fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013243 not found in 325aa AT1G08810.1 not_1st 0.566355140 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08810.1     MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
pt013243_POPTR_ MGRPPCCDKDGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
                ********* **************************************************

AT1G08810.1     LRPGIKRGNFTPHEEGMIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNKSD
pt013243_POPTR_ LRPGIKRGNFTPHEEGMIIHLQAILGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQ
                ***********************:******:*************************:* :

AT1G08810.1     S-------------------DERSRSENIALQTSSTRNTINHRSTYASSTENISRLLEGW
pt013243_POPTR_ SAWDPMAQDSTSSQFTSKSFNDRKSLDNFTTNSSSALRP-NQASTYASSTENISRLLEGW
                *                   ::*.  :*:: ::**: .. *: *****************

AT1G08810.1     MRASPKSSTSTTFLEHKMQNRTNNFIDHHSDQFPYEQLQGSWEEGHSKGINGDDDQGIKN
pt013243_POPTR_ MRSSPKPNSSNFLLK---ENR--------------EQENNSQE---------NNDHDIAN
                **:***..:*. :*:   :**              ** :.* *         ::*:.* *

AT1G08810.1     S-------------ENNNGDDVHHED--------------------------------GD
pt013243_POPTR_ SVAINYLQSYKEKPEQERGDLISHEEFESILSLESLHNVAWDKSCCDSGTVTTTTTTKGF
                *             *::.** : **:                                * 

AT1G08810.1     H-------------EDDDDHNATPPLTFIEKWLLEETSTTGGQMEEMSHLMELSNML
pt013243_POPTR_ HISASDEKENMTMIERNQKSESTPPLSFLEKWLWDENG--AGQVEE---IMELSPIF
                *             * ::. ::****:*:**** :*..  .**:**   :**** ::
BoxShade v3.31 C (beta, 970507) Output
AT1G08810.1     M G R P P C C D K I G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L L R C S K S C R L R W T N Y
pt013243_POPTR_    M G R P P C C D K D G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L L R C S K S C R L R W T N Y
 
AT1G08810.1     L R P G I K R G N F T P H E E G M I I H L Q A L L G N K W A S I A S Y L P Q R T D N D I K N Y W N T H L K K K L N K S D
pt013243_POPTR_    L R P G I K R G N F T P H E E G M I I H L Q A I L G N K W A A I A S Y L P Q R T D N D I K N Y W N T H L K K K L K K F Q
 
AT1G08810.1     S - - - - - - - - - - - - - - - - - - - D E R S R S E N I A L Q T S S T R N T I N H R S T Y A S S T E N I S R L L E G W
pt013243_POPTR_    S A W D P M A Q D S T S S Q F T S K S F N D R K S L D N F T T N S S S A L R P - N Q A S T Y A S S T E N I S R L L E G W
 
AT1G08810.1     M R A S P K S S T S T T F L E H K M Q N R T N N F I D H H S D Q F P Y E Q L Q G S W E E G H S K G I N G D D D Q G I K N
pt013243_POPTR_    M R S S P K P N S S N F L L K - - - E N R - - - - - - - - - - - - - - E Q E N N S Q E - - - - - - - - - N N D H D I A N
 
AT1G08810.1     S - - - - - - - - - - - - - E N N N G D D V H H E D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G D
pt013243_POPTR_    S V A I N Y L Q S Y K E K P E Q E R G D L I S H E E F E S I L S L E S L H N V A W D K S C C D S G T V T T T T T T K G F
 
AT1G08810.1     H - - - - - - - - - - - - - E D D D D H N A T P P L T F I E K W L L E E T S T T G G Q M E E M S H L M E L S N M L
pt013243_POPTR_    H I S A S D E K E N M T M I E R N Q K S E S T P P L S F L E K W L W D E N G - - A G Q V E E - - - I M E L S P I F
 
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