fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003833 not found in 322aa AT3G47600.1 not_not 0.500934579 III
Pt018670 not found in 354aa AT3G28910.1 not_not 0.495327102 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08810.1     --------------------------------------------MGRPPCCDKIGIKKGP
pt018670_POPTR_ MLVLSLEKIKQFQEKRRIKARVVFLLERKKSWRQACEKGRNKVIMGRPPCCDKIGVMKGP
pt003833_POPTR_ --------------------------------------------MGRPPCCDKIGVKKGP
                                                            ***********: ***

AT1G08810.1     WTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEG
pt018670_POPTR_ WTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTHNEEK
pt003833_POPTR_ WTPEEDIILVSYIQEHGPGNWRAVPTSTGLLRCSKSCRLRWTNYLRPGIKRGNFTDHEEK
                **********************:***.**************************** :** 

AT1G08810.1     MIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNKSDSDERSRSE--------
pt018670_POPTR_ MIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHL-KKLKKLQAGQEGQFR--------
pt003833_POPTR_ MIIHLQALLGNRWAAIASYLPQRTDNDIKNFWNTHLKKKLRKLQAGQEGQSRDGLSSTGS
                ***********:**:***************:***** ***.* ::.:..: .        

AT1G08810.1     -NIA-------LQT--SSTRNTINH-------------------------RSTYASSTEN
pt018670_POPTR_ -QISRGQWERRLQTDIHMARQALSEALSPEKPNSLLTELKPSCGYEKPAPASLYASSTEN
pt003833_POPTR_ QQISRGQWERRLQTDINMARQALCEALSPGKPSSLLTGLKPSCGYEKPATEPIYASSTEN
                 :*:       ***    :*::: .                          . *******

AT1G08810.1     ISRLLEGWMRASPKSSTSTTFLEHKMQNRTNNFIDHH-SDQFPYEQLQGSWEEGHSK---
pt018670_POPTR_ IAKLLKGWMRSGPNQSLTNS------TTTQNSFNNMAVADSFSSEETLNRADENDTELSE
pt003833_POPTR_ ISRLLKGWMISGPKQSLKNS-------TTQNSFIDTAGADSLSSEGTPDKADKNGTGLSQ
                *::**:*** :.*:.* ..:       .  *.* :   :*.:. *   .  ::. :    

AT1G08810.1     ------GINGDDDQGIKNSENNNGDDVHHEDGDHEDDDDHNATPPLTFIEKWLLEETSTT
pt018670_POPTR_ AFESLFG---FDSSNIDFSQSTSPDTGLLQD---ESKPNSSAQVPLSVIERWLFDE----
pt003833_POPTR_ AFESLFGFDSFDSSNSDFSQSMSPDTGLFQD---ESKPNSSAQVPLSLIERWLFDE----
                      *    *... . *:. . *    :*   *.. : .*  **:.**:**::*    

AT1G08810.1     GGQMEEMSHLMELS----NML
pt018670_POPTR_ -GAMQGKEYLSEVTPDENNLF
pt003833_POPTR_ -GAMQGKDYINEVTIDEDNLF
                 * *:  .:: *::    *::
BoxShade v3.31 C (beta, 970507) Output
AT1G08810.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R P P C C D K I G I K K G P
pt018670_POPTR_    M L V L S L E K I K Q F Q E K R R I K A R V V F L L E R K K S W R Q A C E K G R N K V I M G R P P C C D K I G V M K G P
pt003833_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R P P C C D K I G V K K G P
 
AT1G08810.1     W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L L R C S K S C R L R W T N Y L R P G I K R G N F T P H E E G
pt018670_POPTR_    W T P E E D I I L V S Y I Q E H G P G N W R A V P T N T G L L R C S K S C R L R W T N Y L R P G I K R G N F T H N E E K
pt003833_POPTR_    W T P E E D I I L V S Y I Q E H G P G N W R A V P T S T G L L R C S K S C R L R W T N Y L R P G I K R G N F T D H E E K
 
AT1G08810.1     M I I H L Q A L L G N K W A S I A S Y L P Q R T D N D I K N Y W N T H L K K K L N K S D S D E R S R S E - - - - - - - -
pt018670_POPTR_    M I I H L Q A L L G N R W A A I A S Y L P Q R T D N D I K N Y W N T H L - K K L K K L Q A G Q E G Q F R - - - - - - - -
pt003833_POPTR_    M I I H L Q A L L G N R W A A I A S Y L P Q R T D N D I K N F W N T H L K K K L R K L Q A G Q E G Q S R D G L S S T G S
 
AT1G08810.1     - N I A - - - - - - - L Q T - - S S T R N T I N H - - - - - - - - - - - - - - - - - - - - - - - - - R S T Y A S S T E N
pt018670_POPTR_    - Q I S R G Q W E R R L Q T D I H M A R Q A L S E A L S P E K P N S L L T E L K P S C G Y E K P A P A S L Y A S S T E N
pt003833_POPTR_    Q Q I S R G Q W E R R L Q T D I N M A R Q A L C E A L S P G K P S S L L T G L K P S C G Y E K P A T E P I Y A S S T E N
 
AT1G08810.1     I S R L L E G W M R A S P K S S T S T T F L E H K M Q N R T N N F I D H H - S D Q F P Y E Q L Q G S W E E G H S K - - -
pt018670_POPTR_    I A K L L K G W M R S G P N Q S L T N S - - - - - - T T T Q N S F N N M A V A D S F S S E E T L N R A D E N D T E L S E
pt003833_POPTR_    I S R L L K G W M I S G P K Q S L K N S - - - - - - - T T Q N S F I D T A G A D S L S S E G T P D K A D K N G T G L S Q
 
AT1G08810.1     - - - - - - G I N G D D D Q G I K N S E N N N G D D V H H E D G D H E D D D D H N A T P P L T F I E K W L L E E T S T T
pt018670_POPTR_    A F E S L F G - - - F D S S N I D F S Q S T S P D T G L L Q D - - - E S K P N S S A Q V P L S V I E R W L F D E - - - -
pt003833_POPTR_    A F E S L F G F D S F D S S N S D F S Q S M S P D T G L F Q D - - - E S K P N S S A Q V P L S L I E R W L F D E - - - -
 
AT1G08810.1     G G Q M E E M S H L M E L S - - - - N M L
pt018670_POPTR_    - G A M Q G K E Y L S E V T P D E N N L F
pt003833_POPTR_    - G A M Q G K D Y I N E V T I D E D N L F
 
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