fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014861 not found in 323aa AT1G08810.1 1st_1st 0.570093457 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08810.1     MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
pt014861_POPTR_ MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
                *********:**************************************************

AT1G08810.1     LRPGIKRGNFTPHEEGMIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNKSD
pt014861_POPTR_ LRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQ
                ******************************:*************************:* :

AT1G08810.1     SD--------------ERSRSENIALQ----TSSTRNTINHRSTYASSTENISRLLEGWM
pt014861_POPTR_ SALDPMAQGSASSQFMSKSFNERKCLDDFTTDSSVLNRPNQVSTYASSTENISRLLEGWM
                *               .:* .*. .*:     **. *  *: ******************

AT1G08810.1     RASPKSSTSTTFLEHKMQNRTNNFIDHHSDQFPYEQLQGSWEEGHSKGINGDDDQGIKNS
pt014861_POPTR_ RSSPKPNGTDLLKENWEKN--NNSLENNGHSF-----------GNSVATNSLQSYRPK-P
                *:***.. :  : *:  :*  ** ::::...*           *:* . *. :.   * .

AT1G08810.1     ENNNGDDVHHEDGD--------------------------------HEDDDDHN------
pt014861_POPTR_ EEESGDLISHEEFESILSLENLNNVAWDKSSCDSATVVTTTKDFKSSTSDEKANITMTER
                *::.** : **: :                                  .*:. *      

AT1G08810.1     ------ATPPLTFIEKWLLEETSTTGGQMEEMSHLMELSNML
pt014861_POPTR_ KQKSDESTPPLSFLEKWLLDENGSV--QVEE---IMELSPIF
                      :****:*:*****:*..:.  *:**   :**** ::
BoxShade v3.31 C (beta, 970507) Output
AT1G08810.1     M G R P P C C D K I G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L L R C S K S C R L R W T N Y
pt014861_POPTR_    M G R P P C C D K V G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L L R C S K S C R L R W T N Y
 
AT1G08810.1     L R P G I K R G N F T P H E E G M I I H L Q A L L G N K W A S I A S Y L P Q R T D N D I K N Y W N T H L K K K L N K S D
pt014861_POPTR_    L R P G I K R G N F T P H E E G M I I H L Q A L L G N K W A A I A S Y L P Q R T D N D I K N Y W N T H L K K K L K K F Q
 
AT1G08810.1     S D - - - - - - - - - - - - - - E R S R S E N I A L Q - - - - T S S T R N T I N H R S T Y A S S T E N I S R L L E G W M
pt014861_POPTR_    S A L D P M A Q G S A S S Q F M S K S F N E R K C L D D F T T D S S V L N R P N Q V S T Y A S S T E N I S R L L E G W M
 
AT1G08810.1     R A S P K S S T S T T F L E H K M Q N R T N N F I D H H S D Q F P Y E Q L Q G S W E E G H S K G I N G D D D Q G I K N S
pt014861_POPTR_    R S S P K P N G T D L L K E N W E K N - - N N S L E N N G H S F - - - - - - - - - - - G N S V A T N S L Q S Y R P K - P
 
AT1G08810.1     E N N N G D D V H H E D G D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H E D D D D H N - - - - - -
pt014861_POPTR_    E E E S G D L I S H E E F E S I L S L E N L N N V A W D K S S C D S A T V V T T T K D F K S S T S D E K A N I T M T E R
 
AT1G08810.1     - - - - - - A T P P L T F I E K W L L E E T S T T G G Q M E E M S H L M E L S N M L
pt014861_POPTR_    K Q K S D E S T P P L S F L E K W L L D E N G S V - - Q V E E - - - I M E L S P I F
 
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