fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051842 not found in 314aa AT1G08810.1 not_1st 0.557009345 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08810.1     MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
gm051842_Glyma1 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNY
                *********:************************************ *************

AT1G08810.1     LRPGIKRGNFTPHEEGMIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNK--
gm051842_Glyma1 LRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQ
                ******************************:*************************:*  

AT1G08810.1     ------SDSDE--------RSRSENIALQTSSTRNT------INHRS-----TYASSTEN
gm051842_Glyma1 AALDPHSASDSTASGQFLPKSFSDRRSLDISSSNNNHGSSIRLSHQSQSSSTTYASSTEN
                      * **.        :* *:. :*: **:.*.      :.*:*     ********

AT1G08810.1     ISRLLEGWMRASPKSSTSTTFLEHKMQNRTNNFIDHHSDQFPYEQLQGSW----EEGHSK
gm051842_Glyma1 ISRLLEGWMRSSPKP------------------------------LKGSSSQDDEDIQLQ
                **********:***.                              *:**     *: : :

AT1G08810.1     GINGDDDQGIKNSENNNGDD----------------------------------------
gm051842_Glyma1 GINDDD----KN--NNNFESTTKLITWFLMKSLILFCLLRTLTMLLGTSPLVIPCQKRVL
                ***.**    **  *** :.                                        

AT1G08810.1     ----VHHEDGDHEDDDDHNATPPLTFIEKWLLEETSTTGGQMEEMSHLMELSNML
gm051842_Glyma1 KLLLTAHERNNIRQKSENSGAPPLSFLEKWLLDE--SVGHQVEEM---MELSPMF
                    . ** .: .:..::..:***:*:*****:*  :.* *:***   **** *:
BoxShade v3.31 C (beta, 970507) Output
AT1G08810.1     M G R P P C C D K I G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L L R C S K S C R L R W T N Y
gm051842_Glyma1    M G R P P C C D K V G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L S R C S K S C R L R W T N Y
 
AT1G08810.1     L R P G I K R G N F T P H E E G M I I H L Q A L L G N K W A S I A S Y L P Q R T D N D I K N Y W N T H L K K K L N K - -
gm051842_Glyma1    L R P G I K R G N F T P H E E G M I I H L Q A L L G N K W A A I A S Y L P Q R T D N D I K N Y W N T H L K K K L K K F Q
 
AT1G08810.1     - - - - - - S D S D E - - - - - - - - R S R S E N I A L Q T S S T R N T - - - - - - I N H R S - - - - - T Y A S S T E N
gm051842_Glyma1    A A L D P H S A S D S T A S G Q F L P K S F S D R R S L D I S S S N N N H G S S I R L S H Q S Q S S S T T Y A S S T E N
 
AT1G08810.1     I S R L L E G W M R A S P K S S T S T T F L E H K M Q N R T N N F I D H H S D Q F P Y E Q L Q G S W - - - - E E G H S K
gm051842_Glyma1    I S R L L E G W M R S S P K P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L K G S S S Q D D E D I Q L Q
 
AT1G08810.1     G I N G D D D Q G I K N S E N N N G D D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm051842_Glyma1    G I N D D D - - - - K N - - N N N F E S T T K L I T W F L M K S L I L F C L L R T L T M L L G T S P L V I P C Q K R V L
 
AT1G08810.1     - - - - V H H E D G D H E D D D D H N A T P P L T F I E K W L L E E T S T T G G Q M E E M S H L M E L S N M L
gm051842_Glyma1    K L L L T A H E R N N I R Q K S E N S G A P P L S F L E K W L L D E - - S V G H Q V E E M - - - M E L S P M F
 
0