fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005808 not found in 342aa AT1G08810.1 1st_1st 0.566355140 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08810.1     MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
gm005808_Glyma0 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNY
                *********:************************************ *************

AT1G08810.1     LRPGIKRGNFTPHEEGMIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNK--
gm005808_Glyma0 LRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQ
                ******************************:*************************:*  

AT1G08810.1     ------SDSDERSRSENIALQTSSTRNTI--------NHRS---------------TYAS
gm005808_Glyma0 AALDPHSASDSTASGQFLPKSFSDRRSTLDISSNNNNNHGSSIRLSHHQSQSSSTTTYAS
                      * **. : .: :. . *. *.*:        ** *               ****

AT1G08810.1     STENISRLLEGWMRASPKSSTSTTFL-----EHKMQ-------NRTNNFID-------HH
gm005808_Glyma0 STENISRLLEGWMRSSPKQLNKGSIISQYDEDHQLQGINDDDDNNNNNFVSTTKLVNLHH
                **************:***. .. :::     :*::*       *..***:.       **

AT1G08810.1     SDQFPYEQLQGSWEEGHSKGING------DDDQGIKNSENNNG--------DDVHHEDGD
gm005808_Glyma0 LHQ---HKIRNKDHEQEGGGVDNNMVSHHEEFDSILSFENQNNAAWDKSTCDSMPEKTAA
                 .*   .:::.. .* .. *::.      :: :.* . **:*.        *.: .: . 

AT1G08810.1     HEDD------DDHNATPPLTFIEKWLLEETSTTGGQMEEMSHLMELSNML
gm005808_Glyma0 HERNNVRQKSENSSGAPPLSFLEKWLLDE--NVGHQVEEM---MELSPMF
                ** :      :: ..:***:*:*****:*  ..* *:***   **** *:
BoxShade v3.31 C (beta, 970507) Output
AT1G08810.1     M G R P P C C D K I G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L L R C S K S C R L R W T N Y
gm005808_Glyma0    M G R P P C C D K V G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L S R C S K S C R L R W T N Y
 
AT1G08810.1     L R P G I K R G N F T P H E E G M I I H L Q A L L G N K W A S I A S Y L P Q R T D N D I K N Y W N T H L K K K L N K - -
gm005808_Glyma0    L R P G I K R G N F T P H E E G M I I H L Q A L L G N K W A A I A S Y L P Q R T D N D I K N Y W N T H L K K K L K K F Q
 
AT1G08810.1     - - - - - - S D S D E R S R S E N I A L Q T S S T R N T I - - - - - - - - N H R S - - - - - - - - - - - - - - - T Y A S
gm005808_Glyma0    A A L D P H S A S D S T A S G Q F L P K S F S D R R S T L D I S S N N N N N H G S S I R L S H H Q S Q S S S T T T Y A S
 
AT1G08810.1     S T E N I S R L L E G W M R A S P K S S T S T T F L - - - - - E H K M Q - - - - - - - N R T N N F I D - - - - - - - H H
gm005808_Glyma0    S T E N I S R L L E G W M R S S P K Q L N K G S I I S Q Y D E D H Q L Q G I N D D D D N N N N N F V S T T K L V N L H H
 
AT1G08810.1     S D Q F P Y E Q L Q G S W E E G H S K G I N G - - - - - - D D D Q G I K N S E N N N G - - - - - - - - D D V H H E D G D
gm005808_Glyma0    L H Q - - - H K I R N K D H E Q E G G G V D N N M V S H H E E F D S I L S F E N Q N N A A W D K S T C D S M P E K T A A
 
AT1G08810.1     H E D D - - - - - - D D H N A T P P L T F I E K W L L E E T S T T G G Q M E E M S H L M E L S N M L
gm005808_Glyma0    H E R N N V R Q K S E N S S G A P P L S F L E K W L L D E - - N V G H Q V E E M - - - M E L S P M F
 
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