fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08970.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053118 not found in 294aa AT1G08970.2 1st_1st 0.718032786 Ia
Pt001546 not found in 247aa AT1G08970.2 1st_1st 0.714754098 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08970.2     ------------------------------------MDQQDHGQSGA---------MNYG
pt001546_POPTR_ ------------------------------------MD----GQPPA--IVSSTSQLQYG
gm053118_Glyma1 MSRNRSHSFCSRTSLSEVLDSQCLRSAASSFGEGNKMDHQGHSQNPSMGVVGSGAQLAYG
                                                    **    .*  :         : **

AT1G08970.2     TNPYQTN-------PMSTTA------ATVAGGAAQPGQLAFHQIHQQQQQQQLAQQLQAF
pt001546_POPTR_ TSPYQPNQMLAASNPGSVT-------GQPVGAQLAQHQLAYQQIH-QQQEQQLQQQLQSF
gm053118_Glyma1 SNPYQPGQITGP--PGSVVTSVGTIQSTPAGAQLGQHQLAYQHIH-QQQQHQLQQQLQQF
                :.***..       * *..       .  .*.     ***:::** ***::** **** *

AT1G08970.2     WENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRS
pt001546_POPTR_ WANQYKEIDKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFSRACEMFILELTLRS
gm053118_Glyma1 WSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRS
                * **::**:*.********************************:*:**************

AT1G08970.2     WNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAA-G
pt001546_POPTR_ WNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVGGPVDA
gm053118_Glyma1 WNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADA
                ********************:******************:****.******:* .... .

AT1G08970.2     YPYGYLPAGTAP-IGNPGMVMGNPGGAYPPN-------PYMGQPMWQQQAPDQPDQEN--
pt001546_POPTR_ LSYCYMPPPHAPQVGAPGMIMGKH--VMDPAMYAQQSHPYMAQHMW----PQGSEQQQSP
gm053118_Glyma1 LPYCYMPPQHASQVGAAGVIMGKP--VMDPNMYAQQSHPYMAPQMW----PQPPDQRQSS
                 .* *:*.  *. :* .*::**:   .  *        ***.  **    *: .:*.:  

AT1G08970.2     ---
pt001546_POPTR_ SDH
gm053118_Glyma1 PEH
BoxShade v3.31 C (beta, 970507) Output
AT1G08970.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Q Q D H G Q S G A - - - - - - - - - M N Y G
pt001546_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D - - - - G Q P P A - - I V S S T S Q L Q Y G
gm053118_Glyma1    M S R N R S H S F C S R T S L S E V L D S Q C L R S A A S S F G E G N K M D H Q G H S Q N P S M G V V G S G A Q L A Y G
 
AT1G08970.2     T N P Y Q T N - - - - - - - P M S T T A - - - - - - A T V A G G A A Q P G Q L A F H Q I H Q Q Q Q Q Q Q L A Q Q L Q A F
pt001546_POPTR_    T S P Y Q P N Q M L A A S N P G S V T - - - - - - - G Q P V G A Q L A Q H Q L A Y Q Q I H - Q Q Q E Q Q L Q Q Q L Q S F
gm053118_Glyma1    S N P Y Q P G Q I T G P - - P G S V V T S V G T I Q S T P A G A Q L G Q H Q L A Y Q H I H - Q Q Q Q H Q L Q Q Q L Q Q F
 
AT1G08970.2     W E N Q F K E I E K T T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V V F A R A C E M F I L E L T L R S
pt001546_POPTR_    W A N Q Y K E I D K V T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V I F S R A C E M F I L E L T L R S
gm053118_Glyma1    W S N Q Y Q E I E K V T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V I F A R A C E M F I L E L T L R S
 
AT1G08970.2     W N H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L R D E V L G S I P R G T V P E A A A A - G
pt001546_POPTR_    W N H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E D L K D E V L A S I P R G T M P V G G P V D A
gm053118_Glyma1    W N H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E D L K D E V L A S I P R G T M P V A G P A D A
 
AT1G08970.2     Y P Y G Y L P A G T A P - I G N P G M V M G N P G G A Y P P N - - - - - - - P Y M G Q P M W Q Q Q A P D Q P D Q E N - -
pt001546_POPTR_    L S Y C Y M P P P H A P Q V G A P G M I M G K H - - V M D P A M Y A Q Q S H P Y M A Q H M W - - - - P Q G S E Q Q Q S P
gm053118_Glyma1    L P Y C Y M P P Q H A S Q V G A A G V I M G K P - - V M D P N M Y A Q Q S H P Y M A P Q M W - - - - P Q P P D Q R Q S S
 
AT1G08970.2     - - -
pt001546_POPTR_    S D H
gm053118_Glyma1    P E H
 
0