fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08970.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp016894 not found in 312aa AT1G56170.2 1st_not 0.616393442 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08970.2     ------------------------------MDQQDHGQSGAMNYGT-NPYQ---------
pp016894_Pp1s40 MENRSQLAQQQAQQQQDVQQQQQQQTVNNMMAQQQPQMQYSQNMGTQQPYQGSQTVGGPD
                                              * **:   . : * ** :***         

AT1G08970.2     TNPMSTTAATVAGGAAQPGQLAFHQIHQQQQ--------QQQLAQQLQAFWENQFKEIEK
pp016894_Pp1s40 TSPSQGGQMQGQSPAAYPAALA-----QQQQVQLSYQHLQQHHQQQLQMFWANQMSEIEQ
                *.* .       . ** *. **     ****        **:  **** ** **:.***:

AT1G08970.2     TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRR
pp016894_Pp1s40 ANDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACEMFILELTLRSWIHTEENKRR
                :.*****.*************************:**:************** ********

AT1G08970.2     TLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAAGYP--YGYLPAG
pp016894_Pp1s40 TLQKNDIAAAITRTDIFDFLVDIVPRDELNKEDGIGVPRGTMPVGSPVSYEGVY-YVPTP
                **********:***************::*..*   .:****:* .:...*   * *:*: 

AT1G08970.2     TAPIGNPGMV----MGN------------PGGAY---------PPNPYMG-----QPMWQ
pp016894_Pp1s40 QGPVPQPAMVSPAMMGNQMFGARPAMAMDPTAMYHPQQQQPQRPPMQYMQQQAPMQQMWP
                 .*: :*.**    ***            * . *         **  **      * ** 

AT1G08970.2     QQAPDQPDQEN-------
pp016894_Pp1s40 QQTTQMPPTQHTSMPPSS
                **:.: *  ::
BoxShade v3.31 C (beta, 970507) Output
AT1G08970.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Q Q D H G Q S G A M N Y G T - N P Y Q - - - - - - - - -
pp016894_Pp1s40    M E N R S Q L A Q Q Q A Q Q Q Q D V Q Q Q Q Q Q Q T V N N M M A Q Q Q P Q M Q Y S Q N M G T Q Q P Y Q G S Q T V G G P D
 
AT1G08970.2     T N P M S T T A A T V A G G A A Q P G Q L A F H Q I H Q Q Q Q - - - - - - - - Q Q Q L A Q Q L Q A F W E N Q F K E I E K
pp016894_Pp1s40    T S P S Q G G Q M Q G Q S P A A Y P A A L A - - - - - Q Q Q Q V Q L S Y Q H L Q Q H H Q Q Q L Q M F W A N Q M S E I E Q
 
AT1G08970.2     T T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V V F A R A C E M F I L E L T L R S W N H T E E N K R R
pp016894_Pp1s40    A N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P V L F A K A C E M F I L E L T L R S W I H T E E N K R R
 
AT1G08970.2     T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L R D E V L G S I P R G T V P E A A A A G Y P - - Y G Y L P A G
pp016894_Pp1s40    T L Q K N D I A A A I T R T D I F D F L V D I V P R D E L N K E D G I G V P R G T M P V G S P V S Y E G V Y - Y V P T P
 
AT1G08970.2     T A P I G N P G M V - - - - M G N - - - - - - - - - - - - P G G A Y - - - - - - - - - P P N P Y M G - - - - - Q P M W Q
pp016894_Pp1s40    Q G P V P Q P A M V S P A M M G N Q M F G A R P A M A M D P T A M Y H P Q Q Q Q P Q R P P M Q Y M Q Q Q A P M Q Q M W P
 
AT1G08970.2     Q Q A P D Q P D Q E N - - - - - - -
pp016894_Pp1s40    Q Q T T Q M P P T Q H T S M P P S S
 
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