fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08970.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014120 not found in 236aa AT1G08970.2 not_1st 0.711475409 II
Pt034313 not found in 258aa AT1G08970.2 not_1st 0.698360655 II
Pt042230 not found in 226aa AT1G08970.2 not_1st 0.698360655 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08970.2     MDQQDHGQSGAMNYGTNP-----------------YQTNPMSTTAATVAG-GAAQPG---
pt014120_POPTR_ MDQQ--------GYGTNP-----------------YQPNQMPAASNPGSV--PGQPA---
pt034313_POPTR_ MDQQ--------GHGQPPTVGMIGRTAPVPYGMASYQPNQMMGPSATGSVQSPTQPAVLA
pt042230_POPTR_ ----------------------------------------MMGPSATGSLQSPTQPAVLT
                                                        *  .: . :   . **.   

AT1G08970.2     ---------QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIM
pt014120_POPTR_ --GAQLEQHQLAYQQIH-QQQQQQLQQQRQSFWTNQYKEIDKVTDFKNHSLPLARIKKIM
pt034313_POPTR_ AASAQLAQHQLAYQHIH-QQQQQQLQQQLQTFWANQYQEIEQTADFKNHSLPLARIKKIM
pt042230_POPTR_ ASSAHLAQHQLAYQHIH-HQQQQQLQQQLQTFWANQYQEIEQTTDFKNHSLPLARIKKIM
                         ***:::** :****** ** *:** **::**::.:****************

AT1G08970.2     KADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFD
pt014120_POPTR_ KADEDVKMISAEAPVIFARACEMFILELTLQSWNHTEENKRRTLQKNDIAAAITRTDIFD
pt034313_POPTR_ KADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD
pt042230_POPTR_ KADEDVRMISAEAPIIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD
                ******:*******::**************:*********************:*******

AT1G08970.2     FLVDIVPREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNPGG--
pt014120_POPTR_ FLVDIVPREDMKDEVLASIPRGTMPVGGPVDALPYCYMPHPHAPQVGTPGMIMGKPVTDP
pt034313_POPTR_ FLVDIVPREDLKDEVLASVPRGSLPVGGPPDALPYYYMPHQLAPQVSAPGMTVGKPVVDQ
pt042230_POPTR_ FLVDIVPREDLKDEVLASVPRGSLPVGGPADALPYYYMPPQLAPQVSAPGMTVGKPVVDQ
                **********::****.*:***::* ...  . ** *:*   ** :. *** :*:*    

AT1G08970.2     ---AYPPNPYMGQPMWQQ--QAPDQPDQEN
pt014120_POPTR_ AMYAQQSHPYMAQHMWPQGPEQQQSPSDQ-
pt034313_POPTR_ SLYGQQSRPYVAQQIWPQ--QTPQPPEDS-
pt042230_POPTR_ AFYGQQSRPYVPQQIWPQ--QTQQPPEDS-
                   .  ..**: * :* *  :  : *.:.
BoxShade v3.31 C (beta, 970507) Output
AT1G08970.2     M D Q Q D H G Q S G A M N Y G T N P - - - - - - - - - - - - - - - - - Y Q T N P M S T T A A T V A G - G A A Q P G - - -
pt014120_POPTR_    M D Q Q - - - - - - - - G Y G T N P - - - - - - - - - - - - - - - - - Y Q P N Q M P A A S N P G S V - - P G Q P A - - -
pt034313_POPTR_    M D Q Q - - - - - - - - G H G Q P P T V G M I G R T A P V P Y G M A S Y Q P N Q M M G P S A T G S V Q S P T Q P A V L A
pt042230_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M G P S A T G S L Q S P T Q P A V L T
 
AT1G08970.2     - - - - - - - - - Q L A F H Q I H Q Q Q Q Q Q Q L A Q Q L Q A F W E N Q F K E I E K T T D F K N H S L P L A R I K K I M
pt014120_POPTR_    - - G A Q L E Q H Q L A Y Q Q I H - Q Q Q Q Q Q L Q Q Q R Q S F W T N Q Y K E I D K V T D F K N H S L P L A R I K K I M
pt034313_POPTR_    A A S A Q L A Q H Q L A Y Q H I H - Q Q Q Q Q Q L Q Q Q L Q T F W A N Q Y Q E I E Q T A D F K N H S L P L A R I K K I M
pt042230_POPTR_    A S S A H L A Q H Q L A Y Q H I H - H Q Q Q Q Q L Q Q Q L Q T F W A N Q Y Q E I E Q T T D F K N H S L P L A R I K K I M
 
AT1G08970.2     K A D E D V R M I S A E A P V V F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A V T R T D I F D
pt014120_POPTR_    K A D E D V K M I S A E A P V I F A R A C E M F I L E L T L Q S W N H T E E N K R R T L Q K N D I A A A I T R T D I F D
pt034313_POPTR_    K A D E D V R M I S A E A P V I F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A I T R T D I F D
pt042230_POPTR_    K A D E D V R M I S A E A P I I F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A I T R T D I F D
 
AT1G08970.2     F L V D I V P R E D L R D E V L G S I P R G T V P E A A A A - G Y P Y G Y L P A G T A P - I G N P G M V M G N P G G - -
pt014120_POPTR_    F L V D I V P R E D M K D E V L A S I P R G T M P V G G P V D A L P Y C Y M P H P H A P Q V G T P G M I M G K P V T D P
pt034313_POPTR_    F L V D I V P R E D L K D E V L A S V P R G S L P V G G P P D A L P Y Y Y M P H Q L A P Q V S A P G M T V G K P V V D Q
pt042230_POPTR_    F L V D I V P R E D L K D E V L A S V P R G S L P V G G P A D A L P Y Y Y M P P Q L A P Q V S A P G M T V G K P V V D Q
 
AT1G08970.2     - - - A Y P P N P Y M G Q P M W Q Q - - Q A P D Q P D Q E N
pt014120_POPTR_    A M Y A Q Q S H P Y M A Q H M W P Q G P E Q Q Q S P S D Q -
pt034313_POPTR_    S L Y G Q Q S R P Y V A Q Q I W P Q - - Q T P Q P P E D S -
pt042230_POPTR_    A F Y G Q Q S R P Y V P Q Q I W P Q - - Q T Q Q P P E D S -
 
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