fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08970.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001546 not found in 247aa AT1G08970.2 1st_1st 0.714754098 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08970.2     MDQQDHG---QSGAMNYGTNPYQ-------TNPMSTTAATVAGGAAQPGQLAFHQIHQQQ
pt001546_POPTR_ MDGQPPAIVSSTSQLQYGTSPYQPNQMLAASNPGSVTGQPVGAQLAQ-HQLAYQQIH-QQ
                ** *  .   .:. ::***.***       :** *.*. .*..  **  ***::*** **

AT1G08970.2     QQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA
pt001546_POPTR_ QEQQLQQQLQSFWANQYKEIDKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFSRA
                *:*** ****:** **:***:*.********************************:*:**

AT1G08970.2     CEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIP
pt001546_POPTR_ CEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIP
                ********************************:******************:****.***

AT1G08970.2     RGTVPEAAAAGYP-----YGYLPAGTAP-IGNPGMVMG----NPGG-AYPPNPYMGQPMW
pt001546_POPTR_ RGTMP----VGGPVDALSYCYMPPPHAPQVGAPGMIMGKHVMDPAMYAQQSHPYMAQHMW
                ***:*    .* *     * *:*.  ** :* ***:**    :*.  *  .:***.* **

AT1G08970.2     -----QQQAPDQPDQEN
pt001546_POPTR_ PQGSEQQQSPSDH----
                     ***:*.:
BoxShade v3.31 C (beta, 970507) Output
AT1G08970.2     M D Q Q D H G - - - Q S G A M N Y G T N P Y Q - - - - - - - T N P M S T T A A T V A G G A A Q P G Q L A F H Q I H Q Q Q
pt001546_POPTR_    M D G Q P P A I V S S T S Q L Q Y G T S P Y Q P N Q M L A A S N P G S V T G Q P V G A Q L A Q - H Q L A Y Q Q I H - Q Q
 
AT1G08970.2     Q Q Q Q L A Q Q L Q A F W E N Q F K E I E K T T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V V F A R A
pt001546_POPTR_    Q E Q Q L Q Q Q L Q S F W A N Q Y K E I D K V T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V I F S R A
 
AT1G08970.2     C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L R D E V L G S I P
pt001546_POPTR_    C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E D L K D E V L A S I P
 
AT1G08970.2     R G T V P E A A A A G Y P - - - - - Y G Y L P A G T A P - I G N P G M V M G - - - - N P G G - A Y P P N P Y M G Q P M W
pt001546_POPTR_    R G T M P - - - - V G G P V D A L S Y C Y M P P P H A P Q V G A P G M I M G K H V M D P A M Y A Q Q S H P Y M A Q H M W
 
AT1G08970.2     - - - - - Q Q Q A P D Q P D Q E N
pt001546_POPTR_    P Q G S E Q Q Q S P S D H - - - -
 
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