fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08970.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006607 not found in 259aa AT1G56170.2 1st_not 0.619672131 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08970.2     MDQQDHGQSGAMNYGTNPYQTNPMSTTA----ATVAGGAA--------------QPGQL-
Os006607_Os02t0 MEPSSQPQP-VMGVATGGSQAYPPPAAAYPPQAMVPGAPAVVPPGSQPSAPFPTNPAQLS
                *: ..: *. .*. .*.  *: * .::*    * *.*..*              :*.** 

AT1G08970.2     AFHQI--------HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKAD
Os006607_Os02t0 AQHQLVYQQAQQFHQQLQQQQ-QQQLREFWANQMEEIEQTTDFKNHSLPLARIKKIMKAD
                * **:        *** ****  ***: ** **::***:*********************

AT1G08970.2     EDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLV
Os006607_Os02t0 EDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLV
                ***************:***:********** ******************:*****:****

AT1G08970.2     DIVPREDLRDEVLGSIPRGTVPE---AAAAGYPYGYLPAGTAPIGNPGMVMGNPGGAYPP
Os006607_Os02t0 DIVPRDEMKEEGLG-LPRVGLPPNVGGAADTYPYYYVPAQQGP--GSGMMYGGQQG-HPV
                *****:::::* ** :**  :*    .**  *** *:**  .*  ..**: *.  * :* 

AT1G08970.2     NPYMGQPMWQQQAPDQPDQEN------
Os006607_Os02t0 TYVWQQP--QEQQEEAPEEQHSLPESS
                .    **  *:*  : *::::
BoxShade v3.31 C (beta, 970507) Output
AT1G08970.2     M D Q Q D H G Q S G A M N Y G T N P Y Q T N P M S T T A - - - - A T V A G G A A - - - - - - - - - - - - - - Q P G Q L -
Os006607_Os02t0    M E P S S Q P Q P - V M G V A T G G S Q A Y P P P A A A Y P P Q A M V P G A P A V V P P G S Q P S A P F P T N P A Q L S
 
AT1G08970.2     A F H Q I - - - - - - - - H Q Q Q Q Q Q Q L A Q Q L Q A F W E N Q F K E I E K T T D F K N H S L P L A R I K K I M K A D
Os006607_Os02t0    A Q H Q L V Y Q Q A Q Q F H Q Q L Q Q Q Q - Q Q Q L R E F W A N Q M E E I E Q T T D F K N H S L P L A R I K K I M K A D
 
AT1G08970.2     E D V R M I S A E A P V V F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V
Os006607_Os02t0    E D V R M I S A E A P V V F A K A C E V F I L E L T L R S W M H T E E N K R R T L Q K N D I A A A I T R T D I Y D F L V
 
AT1G08970.2     D I V P R E D L R D E V L G S I P R G T V P E - - - A A A A G Y P Y G Y L P A G T A P I G N P G M V M G N P G G A Y P P
Os006607_Os02t0    D I V P R D E M K E E G L G - L P R V G L P P N V G G A A D T Y P Y Y Y V P A Q Q G P - - G S G M M Y G G Q Q G - H P V
 
AT1G08970.2     N P Y M G Q P M W Q Q Q A P D Q P D Q E N - - - - - -
Os006607_Os02t0    T Y V W Q Q P - - Q E Q Q E E A P E E Q H S L P E S S
 
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