fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08970.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015279 not found in 253aa AT1G56170.2 1st_not 0.606557377 II
Sb023436 not found in 328aa AT1G08970.2 not_1st 0.567213114 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G08970.2     MDQQDHGQSGAMNYGTNPYQTNPMSTTAATVAGG---------AAQ---PGQL-AFHQI-
Sb023436_Sorbi1 --------------------KAPSSSSSS--------------SAPNP-PPRLATGHNPS
Sb015279_Sorbi1 MEPSSQPQP-VMGVGSQPYPAAASYAAPTMVAGAPAVPPGSQPAAQFPNPAQLSAQHQMV
                                      .  ::.:              :*    * :* : *:  

AT1G08970.2     --------HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLA--------------
Sb023436_Sorbi1 CPRI----HGSQQIQH------------------PSAASSHGRPRCLPSGGVPSRRGRRR
Sb015279_Sorbi1 YQQAQQFHHQLQQQQQ--QQLREFWTTQMDEIEQTTDFKNHTLPLA--------------
                        *  ** *:                  .:  ..*  * .              

AT1G08970.2     --------RIKKIMKADEDVRMISAEAPVVFARAC-----EMFILELTLRSWNHTEENKR
Sb023436_Sorbi1 GRLRAAALRAARSCRGPAGGRRAAAAAADVLGGAVPRDRGHHRLQEPQPPARPHQEDHEG
Sb015279_Sorbi1 --------RIKKIMKADEDVRMISAEAPVVFAKAC-----EVFILELTLRSWMHTEENKR
                        *  :  :.  . *  :* *. *:. *      .  : *    :  * *::: 

AT1G08970.2     RTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAA-----------
Sb023436_Sorbi1 RRGRPHDRRRGPRR--VRPGLRDVHPRAH--------PPRLGARRGEQAPHASEVRHCRC
Sb015279_Sorbi1 RTLQKNDIAAAITRTDIYDFLVDIIPRDEMKEEGLG-LPRVGLPPAMGAP----ADH---
                *  : :*   .  *  :   * *: ** .         **     .  *           

AT1G08970.2     -------GYPYGYLPAGTAPIGNPGMVMGNPG-----------------GAYPPN-----
Sb023436_Sorbi1 HRPHRGVRLPRGHRSARR----RKGRRRGGRRSCCGCCCRDPASCRGSTGHRPPRLLLCA
Sb015279_Sorbi1 ------SSYPYYYVPAQQVP--GAGMMYGGQ-----------------------------
                         *  : .*        *   *.                              

AT1G08970.2     ---PYMGQP---MWQQ-QAP-DQPDQEN-----
Sb023436_Sorbi1 SAVMYHHRPVIVS--------------------
Sb015279_Sorbi1 -----QGQPMTYMWQKPQVPEEEPSEEQQQQSP
                       :*
BoxShade v3.31 C (beta, 970507) Output
AT1G08970.2     M D Q Q D H G Q S G A M N Y G T N P Y Q T N P M S T T A A T V A G G - - - - - - - - - A A Q - - - P G Q L - A F H Q I -
Sb023436_Sorbi1    - - - - - - - - - - - - - - - - - - - - K A P S S S S S S - - - - - - - - - - - - - - S A P N P - P P R L A T G H N P S
Sb015279_Sorbi1    M E P S S Q P Q P - V M G V G S Q P Y P A A A S Y A A P T M V A G A P A V P P G S Q P A A Q F P N P A Q L S A Q H Q M V
 
AT1G08970.2     - - - - - - - - H Q Q Q Q Q Q Q L A Q Q L Q A F W E N Q F K E I E K T T D F K N H S L P L A - - - - - - - - - - - - - -
Sb023436_Sorbi1    C P R I - - - - H G S Q Q I Q H - - - - - - - - - - - - - - - - - - P S A A S S H G R P R C L P S G G V P S R R G R R R
Sb015279_Sorbi1    Y Q Q A Q Q F H H Q L Q Q Q Q Q - - Q Q L R E F W T T Q M D E I E Q T T D F K N H T L P L A - - - - - - - - - - - - - -
 
AT1G08970.2     - - - - - - - - R I K K I M K A D E D V R M I S A E A P V V F A R A C - - - - - E M F I L E L T L R S W N H T E E N K R
Sb023436_Sorbi1    G R L R A A A L R A A R S C R G P A G G R R A A A A A A D V L G G A V P R D R G H H R L Q E P Q P P A R P H Q E D H E G
Sb015279_Sorbi1    - - - - - - - - R I K K I M K A D E D V R M I S A E A P V V F A K A C - - - - - E V F I L E L T L R S W M H T E E N K R
 
AT1G08970.2     R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L R D E V L G S I P R G T V P E A A A A - - - - - - - - - - -
Sb023436_Sorbi1    R R G R P H D R R R G P R R - - V R P G L R D V H P R A H - - - - - - - - P P R L G A R R G E Q A P H A S E V R H C R C
Sb015279_Sorbi1    R T L Q K N D I A A A I T R T D I Y D F L V D I I P R D E M K E E G L G - L P R V G L P P A M G A P - - - - A D H - - -
 
AT1G08970.2     - - - - - - - G Y P Y G Y L P A G T A P I G N P G M V M G N P G - - - - - - - - - - - - - - - - - G A Y P P N - - - - -
Sb023436_Sorbi1    H R P H R G V R L P R G H R S A R R - - - - R K G R R R G G R R S C C G C C C R D P A S C R G S T G H R P P R L L L C A
Sb015279_Sorbi1    - - - - - - S S Y P Y Y Y V P A Q Q V P - - G A G M M Y G G Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G08970.2     - - - P Y M G Q P - - - M W Q Q - Q A P - D Q P D Q E N - - - - -
Sb023436_Sorbi1    S A V M Y H H R P V I V S - - - - - - - - - - - - - - - - - - - -
Sb015279_Sorbi1    - - - - - Q G Q P M T Y M W Q K P Q V P E E E P S E E Q Q Q Q S P
 
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