fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G08970.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053118 not found in 294aa AT1G08970.2 1st_1st 0.718032786 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G08970.2     ------------------------------------MDQQDHGQSGAMN---------YG
gm053118_Glyma1 MSRNRSHSFCSRTSLSEVLDSQCLRSAASSFGEGNKMDHQGHSQNPSMGVVGSGAQLAYG
                                                    **:*.*.*. :*.         **

AT1G08970.2     TNPYQ----TNP-------MSTTAATVAGGAAQPGQLAFHQIHQQQQQQQLAQQLQAFWE
gm053118_Glyma1 SNPYQPGQITGPPGSVVTSVGTIQSTPAGAQLGQHQLAYQHIH-QQQQHQLQQQLQQFWS
                :****    *.*       :.*  :* **.     ***:::** ****:** **** **.

AT1G08970.2     NQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWN
gm053118_Glyma1 NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWN
                **::****.********************************:******************

AT1G08970.2     HTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAA-GYP
gm053118_Glyma1 HTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALP
                ******************:******************:****.******:* *..* . *

AT1G08970.2     YGYLPAGTAP-IGNPGMVMGNPGGAYPPN-------PYMGQPMWQQQAPDQPDQEN----
gm053118_Glyma1 YCYMPPQHASQVGAAGVIMGKP--VMDPNMYAQQSHPYMAPQMW----PQPPDQRQSSPE
                * *:*.  *. :* .*::**:*  .  **       ***.  **    *: ***.:    

AT1G08970.2     -
gm053118_Glyma1 H
BoxShade v3.31 C (beta, 970507) Output
AT1G08970.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Q Q D H G Q S G A M N - - - - - - - - - Y G
gm053118_Glyma1    M S R N R S H S F C S R T S L S E V L D S Q C L R S A A S S F G E G N K M D H Q G H S Q N P S M G V V G S G A Q L A Y G
 
AT1G08970.2     T N P Y Q - - - - T N P - - - - - - - M S T T A A T V A G G A A Q P G Q L A F H Q I H Q Q Q Q Q Q Q L A Q Q L Q A F W E
gm053118_Glyma1    S N P Y Q P G Q I T G P P G S V V T S V G T I Q S T P A G A Q L G Q H Q L A Y Q H I H - Q Q Q Q H Q L Q Q Q L Q Q F W S
 
AT1G08970.2     N Q F K E I E K T T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V V F A R A C E M F I L E L T L R S W N
gm053118_Glyma1    N Q Y Q E I E K V T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V I F A R A C E M F I L E L T L R S W N
 
AT1G08970.2     H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L R D E V L G S I P R G T V P E A A A A - G Y P
gm053118_Glyma1    H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E D L K D E V L A S I P R G T M P V A G P A D A L P
 
AT1G08970.2     Y G Y L P A G T A P - I G N P G M V M G N P G G A Y P P N - - - - - - - P Y M G Q P M W Q Q Q A P D Q P D Q E N - - - -
gm053118_Glyma1    Y C Y M P P Q H A S Q V G A A G V I M G K P - - V M D P N M Y A Q Q S H P Y M A P Q M W - - - - P Q P P D Q R Q S S P E
 
AT1G08970.2     -
gm053118_Glyma1    H
 
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