fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp018837 not found in 218aa AT4G14540.1 1st_not 0.514184397 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09030.1     MTD---------------------------------EDRLLPIANVGRLMKQILPSNAKI
pp018837_Pp1s46 MADSYGHNPGSPENDPHSDNESGGGHYRDHDASVREQDRFLPIANVSRIMKKALPSNAKI
                *:*                                 :**:******.*:**: *******

AT1G09030.1     SKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALSTLGLDNYADAVGRHL
pp018837_Pp1s46 SKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYL
                **:**:*****.:*****:* ***:**:**:***:****: **:****:::*.:.:  :*

AT1G09030.1     HKYREAERERTEHNKGSNDSGNEKETNTRS-----------------------------D
pp018837_Pp1s46 HKYRELEGEKTSVTKGGDHSAG-KESNQSNQGGIGSLGMPGGMIGMNGSMHQQGIPVSMQ
                ***** * *:*. .**.:.*.. **:*  .                             :

AT1G09030.1     VQNQS-----------------TKFIRVVEKGSSSSAR-
pp018837_Pp1s46 MMQQSYGHQSPLGMMFAPHQTIPQYQMSMQSGSNQSRGL
                : :**                 .::   ::.**..*
BoxShade v3.31 C (beta, 970507) Output
AT1G09030.1     M T D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E D R L L P I A N V G R L M K Q I L P S N A K I
pp018837_Pp1s46    M A D S Y G H N P G S P E N D P H S D N E S G G G H Y R D H D A S V R E Q D R F L P I A N V S R I M K K A L P S N A K I
 
AT1G09030.1     S K E A K Q T V Q E C A T E F I S F V T C E A S E K C H R E N R K T V N G D D I W W A L S T L G L D N Y A D A V G R H L
pp018837_Pp1s46    S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E D Y V E P L K V Y L
 
AT1G09030.1     H K Y R E A E R E R T E H N K G S N D S G N E K E T N T R S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D
pp018837_Pp1s46    H K Y R E L E G E K T S V T K G G D H S A G - K E S N Q S N Q G G I G S L G M P G G M I G M N G S M H Q Q G I P V S M Q
 
AT1G09030.1     V Q N Q S - - - - - - - - - - - - - - - - - T K F I R V V E K G S S S S A R -
pp018837_Pp1s46    M M Q Q S Y G H Q S P L G M M F A P H Q T I P Q Y Q M S M Q S G S N Q S R G L
 
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