fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015514 not found in 149aa AT1G09030.1 not_1st 0.585106382 II
Pt014326 not found in 143aa AT1G09030.1 not_1st 0.531914893 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G09030.1     MTDE--DRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHREN
pt015514_POPTR_ -MEEEQDKLLPIANVGRIMKQILPPTAKISKEAKQTMQECATEFISFVTGEASDKCHKEN
pt014326_POPTR_ MDDDKQDQLLPIANVGRVMKQHLPPTARVSKEAKQRMQECATEFISFVTSEASNKCRKEN
                  ::  *:*********:*** **..*::****** :************ ***:**::**

AT1G09030.1     RKTVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERER-TEHNKGSNDSG--NEKETNT
pt015514_POPTR_ RKTVNGDDICWALGSLGFDDYAEAIVRYLHRYREVERERSANQHKASGTEQ--DIEESNH
pt014326_POPTR_ RKALNGDDVCWALSSLGFDDYADTTVRYLHKYREAEREK-ADQKKATDTEKVNKDEESNH
                **::****: ***.:**:*:**::  *:**:***.***: ::::*.:. .   . :*:* 

AT1G09030.1     RS---------DVQNQSTKFIRVVEKGSSSSAR---
pt015514_POPTR_ ISFQPQQ----QIEAPNGIEFRILDKGNGSSFTNPS
pt014326_POPTR_ TSCQAVQQQTDQIPEPTILEFRFL------------
                 *         ::   .   :*.:
BoxShade v3.31 C (beta, 970507) Output
AT1G09030.1     M T D E - - D R L L P I A N V G R L M K Q I L P S N A K I S K E A K Q T V Q E C A T E F I S F V T C E A S E K C H R E N
pt015514_POPTR_    - M E E E Q D K L L P I A N V G R I M K Q I L P P T A K I S K E A K Q T M Q E C A T E F I S F V T G E A S D K C H K E N
pt014326_POPTR_    M D D D K Q D Q L L P I A N V G R V M K Q H L P P T A R V S K E A K Q R M Q E C A T E F I S F V T S E A S N K C R K E N
 
AT1G09030.1     R K T V N G D D I W W A L S T L G L D N Y A D A V G R H L H K Y R E A E R E R - T E H N K G S N D S G - - N E K E T N T
pt015514_POPTR_    R K T V N G D D I C W A L G S L G F D D Y A E A I V R Y L H R Y R E V E R E R S A N Q H K A S G T E Q - - D I E E S N H
pt014326_POPTR_    R K A L N G D D V C W A L S S L G F D D Y A D T T V R Y L H K Y R E A E R E K - A D Q K K A T D T E K V N K D E E S N H
 
AT1G09030.1     R S - - - - - - - - - D V Q N Q S T K F I R V V E K G S S S S A R - - -
pt015514_POPTR_    I S F Q P Q Q - - - - Q I E A P N G I E F R I L D K G N G S S F T N P S
pt014326_POPTR_    T S C Q A V Q Q Q T D Q I P E P T I L E F R F L - - - - - - - - - - - -
 
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