fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001709 not found in 149aa AT1G09030.1 1st_1st 0.599290780 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09030.1     MTDE-DRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENR
pt001709_POPTR_ MDDEQDRLLPIANVGRMMKKILPPTAKISKEAKQTMQECATEFVSFVTGEASDKCQKENR
                * ** ***********:**:***..**********:*******:**** ***:**::***

AT1G09030.1     KTVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERERT--EHNKGSNDSGNEKETNTRS
pt001709_POPTR_ KTVNGDDICWALISLGFDDHAEAMVRYLHKYREAERERSTNQHKASGTDQGEESNHESKQ
                ******** *** :**:*::*:*: *:***********:  :*: ...*.*:*.: :::.

AT1G09030.1     DVQ-----NQSTKFIRVVEKGSSSSAR---
pt001709_POPTR_ PKQPIEAPNNGVEF-RVLEKGNSSSFTNPS
                  *     *:..:* **:***.***
BoxShade v3.31 C (beta, 970507) Output
AT1G09030.1     M T D E - D R L L P I A N V G R L M K Q I L P S N A K I S K E A K Q T V Q E C A T E F I S F V T C E A S E K C H R E N R
pt001709_POPTR_    M D D E Q D R L L P I A N V G R M M K K I L P P T A K I S K E A K Q T M Q E C A T E F V S F V T G E A S D K C Q K E N R
 
AT1G09030.1     K T V N G D D I W W A L S T L G L D N Y A D A V G R H L H K Y R E A E R E R T - - E H N K G S N D S G N E K E T N T R S
pt001709_POPTR_    K T V N G D D I C W A L I S L G F D D H A E A M V R Y L H K Y R E A E R E R S T N Q H K A S G T D Q G E E S N H E S K Q
 
AT1G09030.1     D V Q - - - - - N Q S T K F I R V V E K G S S S S A R - - -
pt001709_POPTR_    P K Q P I E A P N N G V E F - R V L E K G N S S S F T N P S
 
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