fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005512 not found in 177aa AT2G47810.1 1st_not 0.514184397 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09030.1     -------------------------------MTDEDRLLPIANVGRLMKQILPSNAKISK
Os005512_Os01t0 MADHHGGHHADGHRRQQQLQGEAADQAAAEIIKEQDRLLPIANVGRIMKQILPPNAKISK
                                               :.::***********:******.******

AT1G09030.1     EAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALSTLGLDNYADAVGRHLHK
Os005512_Os01t0 EAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWAFGALGFDDYVDPMRRYLNK
                ***:*:***.:******* ***:***:*:********: **:.:**:*:*.*.: *:*:*

AT1G09030.1     YREAERER-----TEHNKGSNDSGNEKETNTRSDVQNQSTKFIRVVEKGSSSSAR--
Os005512_Os01t0 YRELEGDRAAAAATSRSGAGAAAGPDHPSSSSSAAAATAGHFMFNAMDRSTDSSRQF
                *** * :*     *.:. ..  :* :: :.: * .   : :*:  . . *:.*:*
BoxShade v3.31 C (beta, 970507) Output
AT1G09030.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T D E D R L L P I A N V G R L M K Q I L P S N A K I S K
Os005512_Os01t0    M A D H H G G H H A D G H R R Q Q Q L Q G E A A D Q A A A E I I K E Q D R L L P I A N V G R I M K Q I L P P N A K I S K
 
AT1G09030.1     E A K Q T V Q E C A T E F I S F V T C E A S E K C H R E N R K T V N G D D I W W A L S T L G L D N Y A D A V G R H L H K
Os005512_Os01t0    E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D V C W A F G A L G F D D Y V D P M R R Y L N K
 
AT1G09030.1     Y R E A E R E R - - - - - T E H N K G S N D S G N E K E T N T R S D V Q N Q S T K F I R V V E K G S S S S A R - -
Os005512_Os01t0    Y R E L E G D R A A A A A T S R S G A G A A A G P D H P S S S S S A A A A T A G H F M F N A M D R S T D S S R Q F
 
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