fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026432 not found in 215aa AT2G47810.1 1st_not 0.528368794 II
Sb009278 not found in 146aa AT1G09030.1 not_1st 0.468085106 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G09030.1     ---------------MTDE-----------------------DRLLPIANVGR--LMKQI
Sb026432_Sorbi1 LKGPGGGVVGAVHGGAEHEMTGCGAGTGAGGRGGTRVVVSAWSGSAPARGCGRGGAVALE
Sb009278_Sorbi1 --MASSSTTQDANNGVRHD-----------------------NNLLPIANVGR--IMKDA
                                 .:                       .   *  . **   :   

AT1G09030.1     LPSNAKISKEAKQTVQEC---------------ATEFISFVTCEASEKCHRENRKTVNGD
Sb026432_Sorbi1 LAVLVEVPAHGVDVVVEAEGAEGPADVVAVDGLALLLVALVGCLAGDE----------AD
Sb009278_Sorbi1 LPPQAKISKHAKETIQEC---------------ATEFVGFVTGEASERCRRERRKTINGD
                *.  .::. .. :.: *.               *  ::.:*   *.:.          .*

AT1G09030.1     DIWWAL--STLGLDNYAD-AVGRHLHKYREAER-ERTEHNKGSNDSGNE------KETNT
Sb026432_Sorbi1 ELGDALLHRLLGL--LGDLGVGR-----------QDLLHDAADVGDGQQPVLLLDLQVTP
Sb009278_Sorbi1 DICHAM--RSLGLDHYAD-SMHRYLQRYRETEELAATLNNGGGGRDGRA------IQIDV
                ::  *:    ***   .* .: *               :: ..  .*.        :   

AT1G09030.1     RSDVQNQSTK---------FIRVVEKGSSSS-AR--------------------------
Sb026432_Sorbi1 SSGAAAHQTRPPPVPVRRLPVEVVGHAAAVRRRRRRLPSPFSSPRPPSLASSSDPLVCVS
Sb009278_Sorbi1 RAELS------------------IFKGSNQQDGRD-------------------------
                 :                     : :.:     *
BoxShade v3.31 C (beta, 970507) Output
AT1G09030.1     - - - - - - - - - - - - - - - M T D E - - - - - - - - - - - - - - - - - - - - - - - D R L L P I A N V G R - - L M K Q I
Sb026432_Sorbi1    L K G P G G G V V G A V H G G A E H E M T G C G A G T G A G G R G G T R V V V S A W S G S A P A R G C G R G G A V A L E
Sb009278_Sorbi1    - - M A S S S T T Q D A N N G V R H D - - - - - - - - - - - - - - - - - - - - - - - N N L L P I A N V G R - - I M K D A
 
AT1G09030.1     L P S N A K I S K E A K Q T V Q E C - - - - - - - - - - - - - - - A T E F I S F V T C E A S E K C H R E N R K T V N G D
Sb026432_Sorbi1    L A V L V E V P A H G V D V V V E A E G A E G P A D V V A V D G L A L L L V A L V G C L A G D E - - - - - - - - - - A D
Sb009278_Sorbi1    L P P Q A K I S K H A K E T I Q E C - - - - - - - - - - - - - - - A T E F V G F V T G E A S E R C R R E R R K T I N G D
 
AT1G09030.1     D I W W A L - - S T L G L D N Y A D - A V G R H L H K Y R E A E R - E R T E H N K G S N D S G N E - - - - - - K E T N T
Sb026432_Sorbi1    E L G D A L L H R L L G L - - L G D L G V G R - - - - - - - - - - - Q D L L H D A A D V G D G Q Q P V L L L D L Q V T P
Sb009278_Sorbi1    D I C H A M - - R S L G L D H Y A D - S M H R Y L Q R Y R E T E E L A A T L N N G G G G R D G R A - - - - - - I Q I D V
 
AT1G09030.1     R S D V Q N Q S T K - - - - - - - - - F I R V V E K G S S S S - A R - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026432_Sorbi1    S S G A A A H Q T R P P P V P V R R L P V E V V G H A A A V R R R R R R L P S P F S S P R P P S L A S S S D P L V C V S
Sb009278_Sorbi1    R A E L S - - - - - - - - - - - - - - - - - - I F K G S N Q Q D G R D - - - - - - - - - - - - - - - - - - - - - - - - -
 
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