fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027754 not found in 119aa AT1G09030.1 not_1st 0.578014184 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09030.1     --MTDEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHREN
gm027754_Glyma1 MDQDEQDRALPIANVSRIMKQILPPSAKISKEGKQVMQECVTEFISFVTGEASDKCHKEN
                    ::** ******.*:******..******.**.:***.******** ***:***:**

AT1G09030.1     RKTVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNKGSNDSGNEKETNTRSD
gm027754_Glyma1 RKTVNGDDICWALSSLGFDNYAEAIGRYLHKYRQAEREKINHDK----------------
                ********* ****:**:****:*:**:*****:****: :*:*                

AT1G09030.1     VQNQSTKFIRVVEKGSSSSAR--
gm027754_Glyma1 ------KVTR--DKGTSPSIYLL
                      *. *  :**:*.*
BoxShade v3.31 C (beta, 970507) Output
AT1G09030.1     - - M T D E D R L L P I A N V G R L M K Q I L P S N A K I S K E A K Q T V Q E C A T E F I S F V T C E A S E K C H R E N
gm027754_Glyma1    M D Q D E Q D R A L P I A N V S R I M K Q I L P P S A K I S K E G K Q V M Q E C V T E F I S F V T G E A S D K C H K E N
 
AT1G09030.1     R K T V N G D D I W W A L S T L G L D N Y A D A V G R H L H K Y R E A E R E R T E H N K G S N D S G N E K E T N T R S D
gm027754_Glyma1    R K T V N G D D I C W A L S S L G F D N Y A E A I G R Y L H K Y R Q A E R E K I N H D K - - - - - - - - - - - - - - - -
 
AT1G09030.1     V Q N Q S T K F I R V V E K G S S S S A R - -
gm027754_Glyma1    - - - - - - K V T R - - D K G T S P S I Y L L
 
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