fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055621 not found in 150aa AT1G09030.1 1st_1st 0.581560283 Ia

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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09030.1     --MTDEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHREN
gm055621_Glyma2 MDQDVQDRALPIANVGRIMKQILPPSAKISKEGKQLMQECVTEFISFVTGEASDKCHKEN
                     :** ********:******..******.** :***.******** ***:***:**

AT1G09030.1     RKTVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNKGSNDSGNEKETN----
gm055621_Glyma2 RKTVNGDDICWALSSLGFDNYAEAIGRYLHIYRQGEREKINHTKKYENPQNQTQINRAPP
                ********* ****:**:****:*:**:** **:.***: :*.*  ::. *:.: *    

AT1G09030.1     ------TRSDVQNQSTKFIRVVEKGSSSSAR
gm055621_Glyma2 PPLLLSRRSYTQGLVTEFNKPIMESSNSGN-
                       ** .*.  *:* : : :.*.*.  


BoxShade v3.31 C (beta, 970507) Output
AT1G09030.1     - - M T D E D R L L P I A N V G R L M K Q I L P S N A K I S K E A K Q T V Q E C A T E F I S F V T C E A S E K C H R E N
gm055621_Glyma2    M D Q D V Q D R A L P I A N V G R I M K Q I L P P S A K I S K E G K Q L M Q E C V T E F I S F V T G E A S D K C H K E N
 
AT1G09030.1     R K T V N G D D I W W A L S T L G L D N Y A D A V G R H L H K Y R E A E R E R T E H N K G S N D S G N E K E T N - - - -
gm055621_Glyma2    R K T V N G D D I C W A L S S L G F D N Y A E A I G R Y L H I Y R Q G E R E K I N H T K K Y E N P Q N Q T Q I N R A P P
 
AT1G09030.1     - - - - - - T R S D V Q N Q S T K F I R V V E K G S S S S A R
gm055621_Glyma2    P P L L L S R R S Y T Q G L V T E F N K P I M E S S N S G N -
 
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