fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012736 not found in 205aa AT1G09250.1 1st_1st 0.376854599 Ib
Gm027674 not found in 199aa AT1G09250.1 1st_1st 0.382789317 Ib
Pt002259 not found in 205aa AT1G09250.1 1st_1st 0.394658753 Ib
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G09250.1     M------VESLFPSIENTGESSRRKKPRIS-ETAEAEIEARRVNEESLKRWKTNRVQQIY
Os012736_Os03t0 MAS----TSGSAAAVEERGNSERKRKRGATGESEGSEAQPS--------KWRTRRAHEIY
gm027674_Glyma1 MASFDPNVDSSNSDTLRESNH--KKRRKIG-----DHAAGDLDFAAAV-PWRSDVEQRIY
pt002259_POPTR_ MASNQLNCDMSSQ---QEQNQRRKKRRKLTHETTESHIQNDSKNQLTV-RWRTEAERRIY
                *       .       .  :   :::          .             *::   :.**

AT1G09250.1     ACKLVEALRRVRQ--RSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAIL-
Os012736_Os03t0 SSKLLDAIRLVRSGSPSSSAAAP-------PRSRAVREAADRALAVSARGRTRWSRAILA
gm027674_Glyma1 SRRLVEALR--RT---PSSATKP-------RAAGQVRETADRVLAATARGRTRWSRAIL-
pt002259_POPTR_ SSKLLEALR--RS---SRTSSHP------GKRTREVRETANRVLAVAARGRTQWSRAIL-
                : :*::*:*  *    . :::           :  :*::*:*.**.:*** *:****** 

AT1G09250.1     --------ASRVRAKLKKHRKAKKSTGNCK-SRKGLTET-NRIKLPAVERKLKILGRLVP
Os012736_Os03t0 SHRRRIQAARRARLREAISPPSRHPSSSSG----------KGPKAPALARKAKVLGRLVP
gm027674_Glyma1 ---------KRWRKLRMQHKKAKAASSNNGLKRTRIGNGERRNRLPAVQKKARVLSRLVP
pt002259_POPTR_ --------AKRARLLRVRKVKKQKLNSDR-----RLQEREKRRKLPAVEKKVKVLSRLVP
                          * *         :  ...            .  : **: :* ::*.****

AT1G09250.1     GCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAAAPRTTLTGT-----------
Os012736_Os03t0 GCRKLPFPALLAEASDYIAALEMQVRAMTALAEVLSTVSG----SGSASSSGGSSSPA
gm027674_Glyma1 GCRKVSFPNLLEEATDYISALEMQVRAMTALAELLAGAAPA-NLAGSA-----LS---
pt002259_POPTR_ GCRKVSFVNLLEEASDYIAALEMQIKVMTTLSEILT-AAGG-EVGGGAGVDGGLSS--
                ****:..  ** **:***:*****::.* :*:*:*: .:      *
BoxShade v3.31 C (beta, 970507) Output
AT1G09250.1     M - - - - - - V E S L F P S I E N T G E S S R R K K P R I S - E T A E A E I E A R R V N E E S L K R W K T N R V Q Q I Y
Os012736_Os03t0    M A S - - - - T S G S A A A V E E R G N S E R K R K R G A T G E S E G S E A Q P S - - - - - - - - K W R T R R A H E I Y
gm027674_Glyma1    M A S F D P N V D S S N S D T L R E S N H - - K K R R K I G - - - - - D H A A G D L D F A A A V - P W R S D V E Q R I Y
pt002259_POPTR_    M A S N Q L N C D M S S Q - - - Q E Q N Q R R K K R R K L T H E T T E S H I Q N D S K N Q L T V - R W R T E A E R R I Y
 
AT1G09250.1     A C K L V E A L R R V R Q - - R S S T T S N N E T D K L V S G A A R E I R D T A D R V L A A S A R G T T R W S R A I L -
Os012736_Os03t0    S S K L L D A I R L V R S G S P S S S A A A P - - - - - - - P R S R A V R E A A D R A L A V S A R G R T R W S R A I L A
gm027674_Glyma1    S R R L V E A L R - - R T - - - P S S A T K P - - - - - - - R A A G Q V R E T A D R V L A A T A R G R T R W S R A I L -
pt002259_POPTR_    S S K L L E A L R - - R S - - - S R T S S H P - - - - - - G K R T R E V R E T A N R V L A V A A R G R T Q W S R A I L -
 
AT1G09250.1     - - - - - - - - A S R V R A K L K K H R K A K K S T G N C K - S R K G L T E T - N R I K L P A V E R K L K I L G R L V P
Os012736_Os03t0    S H R R R I Q A A R R A R L R E A I S P P S R H P S S S S G - - - - - - - - - - K G P K A P A L A R K A K V L G R L V P
gm027674_Glyma1    - - - - - - - - - K R W R K L R M Q H K K A K A A S S N N G L K R T R I G N G E R R N R L P A V Q K K A R V L S R L V P
pt002259_POPTR_    - - - - - - - - A K R A R L L R V R K V K K Q K L N S D R - - - - - R L Q E R E K R R K L P A V E K K V K V L S R L V P
 
AT1G09250.1     G C R K V S V P N L L D E A T D Y I A A L E M Q V R A M E A L A E L L T A A A P R T T L T G T - - - - - - - - - - -
Os012736_Os03t0    G C R K L P F P A L L A E A S D Y I A A L E M Q V R A M T A L A E V L S T V S G - - - - S G S A S S S G G S S S P A
gm027674_Glyma1    G C R K V S F P N L L E E A T D Y I S A L E M Q V R A M T A L A E L L A G A A P A - N L A G S A - - - - - L S - - -
pt002259_POPTR_    G C R K V S F V N L L E E A S D Y I A A L E M Q I K V M T T L S E I L T - A A G G - E V G G G A G V D G G L S S - -
 
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