fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027674 not found in 199aa AT1G09250.1 1st_1st 0.382789317 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09250.1     MVESLFPSIENTG-----ESSRRKKPRISETAEAEIE-ARRVNEESLKRWKTNRVQQIYA
gm027674_Glyma1 -MASFDPNVDSSNSDTLRESNHKKRRKIGDHAAGDLDFAAAVP------WRSDVEQRIYS
                 : *: *.::.:.     **.::*: :*.: * .::: *  *       *:::  *:**:

AT1G09250.1     CKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRV
gm027674_Glyma1 RRLVEALRRT--PSSATKPR--------AAGQVRETADRVLAATARGRTRWSRAIL-KRW
                 :*******.   **:*. .        ** ::*:********:*** ******** .* 

AT1G09250.1     RAKLKKHRKAKKSTGNCKSRKGLTET------NRIKLPAVERKLKILGRLVPGCRKVSVP
gm027674_Glyma1 RKLRMQHKKAKAASSN----NGLKRTRIGNGERRNRLPAVQKKARVLSRLVPGCRKVSFP
                *    :*:*** ::.*    :**..*      .* :****::* ::*.**********.*

AT1G09250.1     NLLDEATDYIAALEMQVRAMEALAELLTAAAPRTTLTGT---
gm027674_Glyma1 NLLEEATDYISALEMQVRAMTALAELLAGAAP-ANLAGSALS
                ***:******:********* ******:.*** :.*:*:
BoxShade v3.31 C (beta, 970507) Output
AT1G09250.1     M V E S L F P S I E N T G - - - - - E S S R R K K P R I S E T A E A E I E - A R R V N E E S L K R W K T N R V Q Q I Y A
gm027674_Glyma1    - M A S F D P N V D S S N S D T L R E S N H K K R R K I G D H A A G D L D F A A A V P - - - - - - W R S D V E Q R I Y S
 
AT1G09250.1     C K L V E A L R R V R Q R S S T T S N N E T D K L V S G A A R E I R D T A D R V L A A S A R G T T R W S R A I L A S R V
gm027674_Glyma1    R R L V E A L R R T - - P S S A T K P R - - - - - - - - A A G Q V R E T A D R V L A A T A R G R T R W S R A I L - K R W
 
AT1G09250.1     R A K L K K H R K A K K S T G N C K S R K G L T E T - - - - - - N R I K L P A V E R K L K I L G R L V P G C R K V S V P
gm027674_Glyma1    R K L R M Q H K K A K A A S S N - - - - N G L K R T R I G N G E R R N R L P A V Q K K A R V L S R L V P G C R K V S F P
 
AT1G09250.1     N L L D E A T D Y I A A L E M Q V R A M E A L A E L L T A A A P R T T L T G T - - -
gm027674_Glyma1    N L L E E A T D Y I S A L E M Q V R A M T A L A E L L A G A A P - A N L A G S A L S
 
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