fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027620 not found in 429aa AT1G09540.1 1st_1st 0.491404011 Ia
Pt000958 not found in 441aa AT1G09540.1 1st_1st 0.551575931 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G09540.1     MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY
gm027620_Glyma1 MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
pt000958_POPTR_ MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKQADLQRCGKSCRLRWINY
                **************************.:**:*********** *.***************

AT1G09540.1     LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG
gm027620_Glyma1 LRPDLKRGAFSQQEENMIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRG
pt000958_POPTR_ LRPDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQRG
                *********** :***:*:**************::***************.:****:***

AT1G09540.1     IDPNTHKPISEVESFSDKDK--PT------------------------------TSNNKR
gm027620_Glyma1 IDPTTHKPLSEVENDKDMNMMPPSTDKSTQKASVGSNEVVSNLVDHH--QPP----KTMP
pt000958_POPTR_ IDPNTHKPLSEVENCKEKQQ--PTADKSNEKVSNVSNEL--NLIEAATLQPPAISSSSKI
                ***.****:****. .: :   *:                                ..  

AT1G09540.1     SGNDHKSPSSSSATN----QDFFLE-----------------RPSDLSD-YFGFQKLNF-
gm027620_Glyma1 NSSSERYPLEVSTTS--STQELFLDRFGTTTTTCHENNN---NTSDLVGSYFSFQHLNYG
pt000958_POPTR_ NNSKDRNSSSSNMTNTPPTKEFFLDRFGTS----HESSPASCRPSDLMG-YFPFQKLDY-
                .....: . . . *.    :::**:                 ..*** . ** **:*:: 

AT1G09540.1     -NSNLGLSVTTDSSLC-----------------SMIPPQFSPGNMVGSVLQTPVCVKPSI
gm027620_Glyma1 TTTSMALSSNPNTSLCFILPSTSSDINNN--NSIITSSSMLP-----SIFPT-----QHV
pt000958_POPTR_ -KPSIGLSMNPNTTLCFN-PNSSSEMISHEFNSCMTPPTILP-SVSTSMFQTPIRVKPSV
                 ...:.** ..:::**                  : .. : *     *:: *       :

AT1G09540.1     SLPPDNNSSSPISGGDHVKLAAPNWEFQTNNNNTS---------------NFFDNGGFSW
gm027620_Glyma1 KLQSNNN--NPSSISSD---GVQNWETSNNTNKNNG------NMQLQSSTNYLDS---TW
pt000958_POPTR_ SLPSDHN---PSVGSCDVN-GVQNWEASSFSNNGSGSNGSSSSIELQSNTNFYESSAFSW
                .* .::*   *   . .   .. *** .. .*: .               *: :.   :*

AT1G09540.1     SIP------NSSTSSSQVK----PNHNFEEIKWSEYLNTPFFIG-STVQS---QTSQPIY
gm027620_Glyma1 GVAESMKIVNINKEAQVVPLQA----EQEDLKWSEYLNTPFILGNNTTQNHQIQTSQSIY
pt000958_POPTR_ GLA------NCGKSGEESHLRSLENDTAEDIKWSEYLNTTFFLG-STIQN---QTSQHVY
                .:.      * .....            *::********.*::* .* *.   **** :*

AT1G09540.1     ---IKSETDYLANVSNMTDPWSQNENLGTTETSDVFSKDLQRMAVSFGQSL
gm027620_Glyma1 TEVIKPETGFIIDESCTSN-WHHHQPPPAFQLSDIYSKDLQRFSVTFGQTL
pt000958_POPTR_ SE-VKPETHFIAEGSSAS--WIPNQHQQASQPADIYTKDLQRLAVAFGQSL
                   :*.** :: : *  :  *  ::   : : :*:::*****::*:***:*
BoxShade v3.31 C (beta, 970507) Output
AT1G09540.1     M G R H S C C Y K Q K L R K G L W S P E E D E K L L T H I T N H G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
gm027620_Glyma1    M G R H S C C Y K Q K L R K G L W S P E E D E K L L N H I T K H G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
pt000958_POPTR_    M G R H S C C Y K Q K L R K G L W S P E E D E K L L N Y I T K H G H G C W S S V P K Q A D L Q R C G K S C R L R W I N Y
 
AT1G09540.1     L R P D L K R G A F S P E E E N L I V E L H A V L G N R W S Q I A S R L P G R T D N E I K N L W N S S I K K K L K Q R G
gm027620_Glyma1    L R P D L K R G A F S Q Q E E N M I V E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R Q R G
pt000958_POPTR_    L R P D L K R G A F S Q Q E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C I K K K L R Q R G
 
AT1G09540.1     I D P N T H K P I S E V E S F S D K D K - - P T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T S N N K R
gm027620_Glyma1    I D P T T H K P L S E V E N D K D M N M M P P S T D K S T Q K A S V G S N E V V S N L V D H H - - Q P P - - - - K T M P
pt000958_POPTR_    I D P N T H K P L S E V E N C K E K Q Q - - P T A D K S N E K V S N V S N E L - - N L I E A A T L Q P P A I S S S S K I
 
AT1G09540.1     S G N D H K S P S S S S A T N - - - - Q D F F L E - - - - - - - - - - - - - - - - - R P S D L S D - Y F G F Q K L N F -
gm027620_Glyma1    N S S S E R Y P L E V S T T S - - S T Q E L F L D R F G T T T T T C H E N N N - - - N T S D L V G S Y F S F Q H L N Y G
pt000958_POPTR_    N N S K D R N S S S S N M T N T P P T K E F F L D R F G T S - - - - H E S S P A S C R P S D L M G - Y F P F Q K L D Y -
 
AT1G09540.1     - N S N L G L S V T T D S S L C - - - - - - - - - - - - - - - - - S M I P P Q F S P G N M V G S V L Q T P V C V K P S I
gm027620_Glyma1    T T T S M A L S S N P N T S L C F I L P S T S S D I N N N - - N S I I T S S S M L P - - - - - S I F P T - - - - - Q H V
pt000958_POPTR_    - K P S I G L S M N P N T T L C F N - P N S S S E M I S H E F N S C M T P P T I L P - S V S T S M F Q T P I R V K P S V
 
AT1G09540.1     S L P P D N N S S S P I S G G D H V K L A A P N W E F Q T N N N N T S - - - - - - - - - - - - - - - N F F D N G G F S W
gm027620_Glyma1    K L Q S N N N - - N P S S I S S D - - - G V Q N W E T S N N T N K N N G - - - - - - N M Q L Q S S T N Y L D S - - - T W
pt000958_POPTR_    S L P S D H N - - - P S V G S C D V N - G V Q N W E A S S F S N N G S G S N G S S S S I E L Q S N T N F Y E S S A F S W
 
AT1G09540.1     S I P - - - - - - N S S T S S S Q V K - - - - P N H N F E E I K W S E Y L N T P F F I G - S T V Q S - - - Q T S Q P I Y
gm027620_Glyma1    G V A E S M K I V N I N K E A Q V V P L Q A - - - - E Q E D L K W S E Y L N T P F I L G N N T T Q N H Q I Q T S Q S I Y
pt000958_POPTR_    G L A - - - - - - N C G K S G E E S H L R S L E N D T A E D I K W S E Y L N T T F F L G - S T I Q N - - - Q T S Q H V Y
 
AT1G09540.1     - - - I K S E T D Y L A N V S N M T D P W S Q N E N L G T T E T S D V F S K D L Q R M A V S F G Q S L
gm027620_Glyma1    T E V I K P E T G F I I D E S C T S N - W H H H Q P P P A F Q L S D I Y S K D L Q R F S V T F G Q T L
pt000958_POPTR_    S E - V K P E T H F I A E G S S A S - - W I P N Q H Q Q A S Q P A D I Y T K D L Q R L A V A F G Q S L
 
0