fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000958 not found in 441aa AT1G09540.1 1st_1st 0.551575931 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09540.1     MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY
pt000958_POPTR_ MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKQADLQRCGKSCRLRWINY
                **************************.:**:*********** *.***************

AT1G09540.1     LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG
pt000958_POPTR_ LRPDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQRG
                *********** :*****:**************::***************.*****:***

AT1G09540.1     IDPNTHKPISEVESFSDKDKPT----------------------------TSNNKRSGND
pt000958_POPTR_ IDPNTHKPLSEVENCKEKQQPTADKSNEKVSNVSNELNLIEAATLQPPAISSSSKINNSK
                ********:****. .:*::**                            :*..* ....

AT1G09540.1     HKSPSSSSATN----QDFFLE-------------RPSDLSDYFGFQKLNFNSNLGLSVTT
pt000958_POPTR_ DRNSSSSNMTNTPPTKEFFLDRFGTSHESSPASCRPSDLMGYFPFQKLDYKPSIGLSMNP
                .:..***. **    ::***:             ***** .** ****:::..:***:..

AT1G09540.1     DSSLC----------------SMIPPQFSPGNMVGSVLQTPVCVKPSISLPPDNNSSSPI
pt000958_POPTR_ NTTLCFNPNSSSEMISHEFNSCMTPPTILP-SVSTSMFQTPIRVKPSVSLPSDHN---PS
                :::**                .* ** : * .:  *::***: ****:***.*:*   * 

AT1G09540.1     SGGDHVKLAAPNWEFQTNNNNTS---------------NFFDNGGFSWSIPNSSTSSSQV
pt000958_POPTR_ VGSCDVN-GVQNWEASSFSNNGSGSNGSSSSIELQSNTNFYESSAFSWGLANCGKSGEES
                 *. .*: .. *** .: .** *               **::...***.:.*...*..: 

AT1G09540.1     K----PNHNFEEIKWSEYLNTPFFIGSTVQSQTSQPIY--IKSETDYLANVSNMTDPWSQ
pt000958_POPTR_ HLRSLENDTAEDIKWSEYLNTTFFLGSTIQNQTSQHVYSEVKPETHFIAEGSSAS--WIP
                :     *.. *:*********.**:***:*.**** :*  :*.**.::*: *. :  *  

AT1G09540.1     NENLGTTETSDVFSKDLQRMAVSFGQSL
pt000958_POPTR_ NQHQQASQPADIYTKDLQRLAVAFGQSL
                *::  :::.:*:::*****:**:*****
BoxShade v3.31 C (beta, 970507) Output
AT1G09540.1     M G R H S C C Y K Q K L R K G L W S P E E D E K L L T H I T N H G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
pt000958_POPTR_    M G R H S C C Y K Q K L R K G L W S P E E D E K L L N Y I T K H G H G C W S S V P K Q A D L Q R C G K S C R L R W I N Y
 
AT1G09540.1     L R P D L K R G A F S P E E E N L I V E L H A V L G N R W S Q I A S R L P G R T D N E I K N L W N S S I K K K L K Q R G
pt000958_POPTR_    L R P D L K R G A F S Q Q E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C I K K K L R Q R G
 
AT1G09540.1     I D P N T H K P I S E V E S F S D K D K P T - - - - - - - - - - - - - - - - - - - - - - - - - - - - T S N N K R S G N D
pt000958_POPTR_    I D P N T H K P L S E V E N C K E K Q Q P T A D K S N E K V S N V S N E L N L I E A A T L Q P P A I S S S S K I N N S K
 
AT1G09540.1     H K S P S S S S A T N - - - - Q D F F L E - - - - - - - - - - - - - R P S D L S D Y F G F Q K L N F N S N L G L S V T T
pt000958_POPTR_    D R N S S S S N M T N T P P T K E F F L D R F G T S H E S S P A S C R P S D L M G Y F P F Q K L D Y K P S I G L S M N P
 
AT1G09540.1     D S S L C - - - - - - - - - - - - - - - - S M I P P Q F S P G N M V G S V L Q T P V C V K P S I S L P P D N N S S S P I
pt000958_POPTR_    N T T L C F N P N S S S E M I S H E F N S C M T P P T I L P - S V S T S M F Q T P I R V K P S V S L P S D H N - - - P S
 
AT1G09540.1     S G G D H V K L A A P N W E F Q T N N N N T S - - - - - - - - - - - - - - - N F F D N G G F S W S I P N S S T S S S Q V
pt000958_POPTR_    V G S C D V N - G V Q N W E A S S F S N N G S G S N G S S S S I E L Q S N T N F Y E S S A F S W G L A N C G K S G E E S
 
AT1G09540.1     K - - - - P N H N F E E I K W S E Y L N T P F F I G S T V Q S Q T S Q P I Y - - I K S E T D Y L A N V S N M T D P W S Q
pt000958_POPTR_    H L R S L E N D T A E D I K W S E Y L N T T F F L G S T I Q N Q T S Q H V Y S E V K P E T H F I A E G S S A S - - W I P
 
AT1G09540.1     N E N L G T T E T S D V F S K D L Q R M A V S F G Q S L
pt000958_POPTR_    N Q H Q Q A S Q P A D I Y T K D L Q R L A V A F G Q S L
 
0