fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G09540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027620 not found in 429aa AT1G09540.1 1st_1st 0.491404011 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G09540.1     MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY
gm027620_Glyma1 MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
                **************************.***:*****************************

AT1G09540.1     LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG
gm027620_Glyma1 LRPDLKRGAFSQQEENMIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRG
                *********** :***:****************::***************.:****:***

AT1G09540.1     IDPNTHKPISEVESFSDKD----KPTTSNNKRSGN-----------DHKSPS--------
gm027620_Glyma1 IDPTTHKPLSEVE--NDKDMNMMPPSTDKSTQKASVGSNEVVSNLVDHHQPPKTMPNSSS
                ***.****:****  .***     *:*.:..:...           **:.*.        

AT1G09540.1     -------SSSATNQDFFLER--------------PSDL-SDYFGFQKLNF--NSNLGLSV
gm027620_Glyma1 ERYPLEVSTTSSTQELFLDRFGTTTTTCHENNNNTSDLVGSYFSFQHLNYGTTTSMALSS
                       *::::.*::**:*              .*** ..**.**:**:  .:.:.** 

AT1G09540.1     TTDSSLCSMIPPQFSPGNMVGSVLQTPVCVKPSI------SLPPDNNSSSPISGGDHVKL
gm027620_Glyma1 NPNTSLCFILPSTSSDINNNNSII-TSSSMLPSIFPTQHVKLQSNNNNPSSIS-SDGVQ-
                ..::*** ::*.  *  *  .*:: *. .: ***      .* .:**..*.** .* *: 

AT1G09540.1     AAPNWEF--QTNNNN-------TSNFFDNGGFSWSIPNSS-----TSSSQVKP-NHNFEE
gm027620_Glyma1 ---NWETSNNTNKNNGNMQLQSSTNYLDS---TWGVAESMKIVNINKEAQVVPLQAEQED
                   ***   :**:**       ::*::*.   :*.:.:*      ...:** * : : *:

AT1G09540.1     IKWSEYLNTPFFIGSTV----QSQTSQPIY---IKSETDYLANVSNMTDPWSQNENLGTT
gm027620_Glyma1 LKWSEYLNTPFILGNNTTQNHQIQTSQSIYTEVIKPETGFIIDES-CTSNWHHHQPPPAF
                :**********::*...    * ****.**   **.**.:: : *  *. * :::   : 

AT1G09540.1     ETSDVFSKDLQRMAVSFGQSL
gm027620_Glyma1 QLSDIYSKDLQRFSVTFGQTL
                : **::******::*:***:*
BoxShade v3.31 C (beta, 970507) Output
AT1G09540.1     M G R H S C C Y K Q K L R K G L W S P E E D E K L L T H I T N H G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
gm027620_Glyma1    M G R H S C C Y K Q K L R K G L W S P E E D E K L L N H I T K H G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
 
AT1G09540.1     L R P D L K R G A F S P E E E N L I V E L H A V L G N R W S Q I A S R L P G R T D N E I K N L W N S S I K K K L K Q R G
gm027620_Glyma1    L R P D L K R G A F S Q Q E E N M I V E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R Q R G
 
AT1G09540.1     I D P N T H K P I S E V E S F S D K D - - - - K P T T S N N K R S G N - - - - - - - - - - - D H K S P S - - - - - - - -
gm027620_Glyma1    I D P T T H K P L S E V E - - N D K D M N M M P P S T D K S T Q K A S V G S N E V V S N L V D H H Q P P K T M P N S S S
 
AT1G09540.1     - - - - - - - S S S A T N Q D F F L E R - - - - - - - - - - - - - - P S D L - S D Y F G F Q K L N F - - N S N L G L S V
gm027620_Glyma1    E R Y P L E V S T T S S T Q E L F L D R F G T T T T T C H E N N N N T S D L V G S Y F S F Q H L N Y G T T T S M A L S S
 
AT1G09540.1     T T D S S L C S M I P P Q F S P G N M V G S V L Q T P V C V K P S I - - - - - - S L P P D N N S S S P I S G G D H V K L
gm027620_Glyma1    N P N T S L C F I L P S T S S D I N N N N S I I - T S S S M L P S I F P T Q H V K L Q S N N N N P S S I S - S D G V Q -
 
AT1G09540.1     A A P N W E F - - Q T N N N N - - - - - - - T S N F F D N G G F S W S I P N S S - - - - - T S S S Q V K P - N H N F E E
gm027620_Glyma1    - - - N W E T S N N T N K N N G N M Q L Q S S T N Y L D S - - - T W G V A E S M K I V N I N K E A Q V V P L Q A E Q E D
 
AT1G09540.1     I K W S E Y L N T P F F I G S T V - - - - Q S Q T S Q P I Y - - - I K S E T D Y L A N V S N M T D P W S Q N E N L G T T
gm027620_Glyma1    L K W S E Y L N T P F I L G N N T T Q N H Q I Q T S Q S I Y T E V I K P E T G F I I D E S - C T S N W H H H Q P P P A F
 
AT1G09540.1     E T S D V F S K D L Q R M A V S F G Q S L
gm027620_Glyma1    Q L S D I Y S K D L Q R F S V T F G Q T L
 
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